Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1007 ATGAAGCACCGAAGCAGGCTCACAATACTGGTTTCAGGTTTTGTAATATTAGCAACCATCCTGCTACATTCAACATTGACGAGCGCACAAGAAGTTGAGGATGAGAGAGAGTTTGATTACACGAAAGGGAGCGAGAAGGGTCCCCTACACTGGGGGGAGCTGAAAAAGGAATGGGCAGCATGTAAAAAAGGAGGAATGCAATCTCCTATTGATTTGTCGAGTCACAGAGTGAAAGTGATCCCCAAGTCAGATGACCTAAACAAGACCTATAAGACTCAAAATGCTACTCTCAAGAACAGAGGCCATGATATAGAGGTGAAATGGGATGGAGATGCTGGCTCAATACGCATCAATGGCACTCGTTTCTTTCTGCAACAAGGCCACTGGCATTCTCCTTCCGAACATACTATCAACGGCAGGAGGTATGACCTGGAGCTCCACATGGTGCATCAAAGCTCGACCCCAGACGGAAAAGAAAAGATTGCTGTTGTTGGACTTCTGTATAAGATTGGCAAACCCGATCCTTTTCTCTCCAAGTTGGTAAAATACATAAACGGGATGGTGGATGAGATACAAGAAAAGAGCATAGGGCTGATTGATCCCTCACAAATCAAGATGGATGGCAACAAGTTCTACAGATATATGGGCTCACTCACTGTCCCTCCTTGCACTGAAGGCGTCATTTGGACCATCAACAAGAAGATAAGAACTGTGTCAAGGGGGCAAGTGAAGCTACTCAGAGAGGCAGTCCACGATTACGCAGAGAGGAATGCCAGACCGGTACAGCCCCTTAATCGACGAGAGATACAGCTTTATGTCCCAAGGAATAAACCGCAGGACGAGAGAGAATTCGATTATTTAGAAGGAAGTGAAAAGGGGCCTCATCGCTGGGGAGAGCTCAAACAAGAATGGGCAGCTTGTAAACATGGAGACACGCAGTCTCCCATAGACTTGTCCAGTTGGAGAGTCAAAGTGATCCCAAAGTTACGCCGTCTCAAAATCAATTACAAACCTTTTAATGCCACCATCACCAACAGAGGCCATGACATTGCGGTATTTTGGAGGGGTGATGCCGGCTCAATACGCGTCAATGCCACCAAATTCTTTCTGCAACAATGCCACTGGCACTCTCCTTCTGAACATGCCATCAATGGCAGAAAGTCTTTAGAAGAAGACATAAAACACATGGTGGATGAAGAAGAAGAAAGAGTGATAGGAGAGATGGATCCGTCAGAAATCCAGATGGGAGGGAAGAGGTATTACAGATACATGGGCTCGCTCACTACGCCTCCTTGCACGGAAGGTGTCATCTGGAACATTGACCAAAAGATAAGGACTGTTTCAAGAGCACAAGTGAACCTATTGAGGCTGGCGGTTCATGATGTAAGTTGGTGA 1395 0.4624 MKHRSRLTILVSGFVILATILLHSTLTSAQEVEDEREFDYTKGSEKGPLHWGELKKEWAACKKGGMQSPIDLSSHRVKVIPKSDDLNKTYKTQNATLKNRGHDIEVKWDGDAGSIRINGTRFFLQQGHWHSPSEHTINGRRYDLELHMVHQSSTPDGKEKIAVVGLLYKIGKPDPFLSKLVKYINGMVDEIQEKSIGLIDPSQIKMDGNKFYRYMGSLTVPPCTEGVIWTINKKIRTVSRGQVKLLREAVHDYAERNARPVQPLNRREIQLYVPRNKPQDEREFDYLEGSEKGPHRWGELKQEWAACKHGDTQSPIDLSSWRVKVIPKLRRLKINYKPFNATITNRGHDIAVFWRGDAGSIRVNATKFFLQQCHWHSPSEHAINGRKSLEEDIKHMVDEEEERVIGEMDPSEIQMGGKRYYRYMGSLTTPPCTEGVIWNIDQKIRTVSRAQVNLLRLAVHDVSW 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1007 464 CDD alpha_CA_prokaryotic_like 47 271 IPR041891 -
Glsi11g1007 464 CDD alpha_CA_prokaryotic_like 293 460 IPR041891 -
Glsi11g1007 464 ProSiteProfiles Alpha-carbonic anhydrases profile. 282 464 IPR001148 -
Glsi11g1007 464 SUPERFAMILY Carbonic anhydrase 283 458 IPR036398 -
Glsi11g1007 464 SMART Carb_anhydrase_2a 286 464 IPR001148 -
Glsi11g1007 464 SMART Carb_anhydrase_2a 40 273 IPR001148 -
Glsi11g1007 464 Pfam Eukaryotic-type carbonic anhydrase 47 270 IPR001148 -
Glsi11g1007 464 Pfam Eukaryotic-type carbonic anhydrase 392 457 IPR001148 -
Glsi11g1007 464 Pfam Eukaryotic-type carbonic anhydrase 293 389 IPR001148 -
Glsi11g1007 464 SUPERFAMILY Carbonic anhydrase 37 269 IPR036398 -
Glsi11g1007 464 Gene3D Alpha carbonic anhydrase 277 391 IPR036398 -
Glsi11g1007 464 ProSitePatterns Alpha-carbonic anhydrases signature. 133 149 IPR018338 GO:0004089|GO:0008270
Glsi11g1007 464 ProSiteProfiles Alpha-carbonic anhydrases profile. 36 273 IPR001148 -
Glsi11g1007 464 Gene3D Alpha carbonic anhydrase 392 463 IPR036398 -
Glsi11g1007 464 Gene3D Alpha carbonic anhydrase 34 276 IPR036398 -
Glsi11g1007 464 PANTHER CARBONIC ANHYDRASE 281 390 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1007 Glsi-ChrGlsi11 6348728 6352805 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2744 02 76884969 76886549 Glsi11g1007 11 6348728 6352805 CCT