Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0900 ATGGCGGCCATAGTTCGCCTGGTAAGACGTACAATCTCCATCTCTTACCTGCCGAGTCAATGCTTCTCCTCAGTGGTTGCCAATTCTCACGCACCTCCGTGCAGCACCTCTCCCTTCCATCTCAAACCCCTCTTTCCTCGTAAAGATCCAGAGGACAGGAATGTCCATTGGGTATTCTTGGGTTGCCCTGGCGTTGGTAAAGGAACCTACGCTAGTCGCCTCTCCAATCTCCTTGGCATCCCTCACATCGCCACTGGGGATCTCGTTCGCGAAGAGCTCGCGTCCTCTGGCTCTCTCTCTGCCCAGCTATCGGAAATTGTAAATCAAGGTAAATTGGTCTCAGATGAAATTATAATAAGTTTATTGTCAAAGAGACTGGCTGCTGGGGAAGCTAAAGGTGAATCAGGATTTATTCTTGACGGTTTTCCTCGAACAGTAAACCAAGCAGAAATTTTGGAAGGGGTAACTGACATTGACTTGGTAGTCAATCTGAAGCTCCGAGAAGATGTACTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAGTCAATGCAGGGGAAATTTTAATGTGGCCTCTATTAACATCAAGGGTGAGAATGGGAGTCCTGGAATTAACATGGCTCCTCTTCTTCCCCCGGCCCATTGTATGTCAAAACTCATCACTCGTTCAGATGATACTGAAGCAATAGTCAAAGAAAGGTTTCGTATATACCATGATATGAGTCAGCCTGTGGAGGGATTTTACCGCAGTCGTCGAAAACTATTGGAGTTTGACCTGCCAGGAGGGATCCCAGAATCCTGGCCGAAGTTGCTGCAAGCTCTTAATCTTGATGATTATTATGAGCCTGAGCAGTCTGCTGCTGCATAA 867 0.4706 MAAIVRLVRRTISISYLPSQCFSSVVANSHAPPCSTSPFHLKPLFPRKDPEDRNVHWVFLGCPGVGKGTYASRLSNLLGIPHIATGDLVREELASSGSLSAQLSEIVNQGKLVSDEIIISLLSKRLAAGEAKGESGFILDGFPRTVNQAEILEGVTDIDLVVNLKLREDVLLEKCLGRRICSQCRGNFNVASINIKGENGSPGINMAPLLPPAHCMSKLITRSDDTEAIVKERFRIYHDMSQPVEGFYRSRRKLLEFDLPGGIPESWPKLLQALNLDDYYEPEQSAAA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0900 288 Gene3D - 46 277 IPR027417 -
Glsi11g0900 288 NCBIfam adenylate kinase 57 275 IPR006259 GO:0004017|GO:0005524|GO:0016776
Glsi11g0900 288 Hamap Adenylate kinase [adk]. 55 275 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 PRINTS Adenylate kinase signature 137 153 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 PRINTS Adenylate kinase signature 239 253 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 PRINTS Adenylate kinase signature 86 100 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 PRINTS Adenylate kinase signature 58 71 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 PRINTS Adenylate kinase signature 222 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 275 IPR027417 -
Glsi11g0900 288 CDD ADK 57 258 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 PANTHER NUCLEOTIDE KINASE 44 272 IPR000850 GO:0005524|GO:0006139|GO:0019205
Glsi11g0900 288 ProSitePatterns Adenylate kinase signature. 137 148 IPR033690 -
Glsi11g0900 288 Pfam Adenylate kinase 60 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0900 Glsi-ChrGlsi11 5657104 5659751 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2860 02 77596938 77599586 Glsi11g0900 11 5657104 5659751 CCT
Glsi11g0900 11 5657104 5659751 Glsi11g0900 11 5657104 5659751 ECH