Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0563 ATGGCTGAAATGACGACGAATCAAGCATCACACTGGTGGTGGCTTGACAATCACAGCACCACTAAACGATCCCCATGGCTCCAATCCACTCTCACTGATCTAAATGTGAAGACAAAGGCAATGTTAAAATTGATTGAACAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAAAAGCGACCAGAGCTTATCAGCATGGTTGAAGATTTCTATCGGACTCACCGCTTATTAGCTGAGCGGTATGATCAAGTCAAACCAGACTCTGGAATTCGCCTCCAGATTACAGGAGGATCTCCTTTTGCTTCAGCCAAGTATCAGTCAGAGAAGTTAACAAGTTCTATGAATCGAAGTTATGATAGCTTTTCAGAGAATTGTGATGAAGAGGAGTCTGCAGATTCTGAAGTTGATGATCCTGAGCTGGAAGAGGAGACCAAATTTGGCCACTGCACGAAGGAGGAGGAAGTTCCATTTGTGGCTGTGAATGATGAAGTGACGAGGTTAAGTGAAGAAATTGAGAGACTCAGAGAAGAGAACAGGGCTTACAAGGATCAACTCAAGCTGAAAGATGCCATGAGAAATGAAGTGATGATGTTGAGGGAGGACATAGAAAGACTCAGCGAAGAGAATAGGGCACAGAAGGGTCAACTCAAGCAGAAAGATGCCATGAGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGGAAGACTCAGAGAAGAGAAACAGGCACAGAAGGATCAACTCAGGCAGAAAGACGAAGAGAAAGTAGAGGTGATAAGGCACCTGAGTTTGGCAATAGATATGCTAAAGCAGGAGAATGTGAATATGAGAAACTTTATTGTTAAGGACTGTCCCAAGAAATGGAAGTACCCATCTGCGTTTAACAAACTCAAGGGAGCATTGTCAGGGATGTTGTTTAATGGGTCTCCATAG 939 0.4334 MAEMTTNQASHWWWLDNHSTTKRSPWLQSTLTDLNVKTKAMLKLIEQDADSFAQRAEMYYKKRPELISMVEDFYRTHRLLAERYDQVKPDSGIRLQITGGSPFASAKYQSEKLTSSMNRSYDSFSENCDEEESADSEVDDPELEEETKFGHCTKEEEVPFVAVNDEVTRLSEEIERLREENRAYKDQLKLKDAMRNEVMMLREDIERLSEENRAQKGQLKQKDAMSGEVMMLREEIGRLREEKQAQKDQLRQKDEEKVEVIRHLSLAIDMLKQENVNMRNFIVKDCPKKWKYPSAFNKLKGALSGMLFNGSP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0563 312 Coils Coil 160 256 - -
Glsi11g0563 312 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Glsi11g0563 312 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Glsi11g0563 312 PANTHER PROTEIN NETWORKED 4A 5 104 - -
Glsi11g0563 312 MobiDBLite consensus disorder prediction 119 143 - -
Glsi11g0563 312 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0563 Glsi-ChrGlsi11 3609086 3610886 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3289 02 80833684 80837483 Glsi11g0563 11 3609086 3610886 CCT
Glsi11g0563 11 3609086 3610886 Glsi11g0563 11 3609086 3610886 ECH