Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0312 ATGAATTCTGGATCCAGCTTAAGAAAAGAGATGGGGCTGTCTTTTACCAAACTTTTTAGCCGGCTCTTTGCAAAGAAAGAGATGCGTATTCTCATGGTAGGTCTTGATGCTGCTGGTAAGACTACCATCTTGTACAAGCTCAAGCTAGGAGAGATTGTGACAACCATTCCCACAATTGGATTTAATGTCGAGACTGTGGAATACAAAAATATTAGCTTCACTGTCTGGGATGTGGGAGGCCAAGACAAGATACGTCCTTTATGGAGACACTACTTCCAAAACACGCAGGGGCTTATCTTTGTGGTTGATAGCAATGATCGTGACCGTGTTGTTGAGGCTAGAGACGAGCTCCACCGAATGTTGAATGAGGATGAGTTGAGAGATGCGGTGCTCCTTGTATTTGCCAACAAACAAGATCTTCCAAATGCTATGAATGCTGCAGAAATCACGGACAAGCTCGGTCTTCATTCTCTTCGCCAACGCCACTGGTATATCCAAAGCACATGTGCTACTTCTGGGGAAGGACTCTACGAGGGACTGGACTGGCTTTCCAACAATATAGCCAACAAGGGTTGA 576 0.4514 MNSGSSLRKEMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0312 191 PRINTS GTP-binding SAR1 protein signature 129 150 IPR006689 GO:0003924|GO:0005525
Glsi11g0312 191 PRINTS GTP-binding SAR1 protein signature 29 52 IPR006689 GO:0003924|GO:0005525
Glsi11g0312 191 PRINTS GTP-binding SAR1 protein signature 84 109 IPR006689 GO:0003924|GO:0005525
Glsi11g0312 191 PRINTS GTP-binding SAR1 protein signature 57 81 IPR006689 GO:0003924|GO:0005525
Glsi11g0312 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 189 IPR027417 -
Glsi11g0312 191 CDD Arf1_5_like 28 186 IPR045872 GO:0003924
Glsi11g0312 191 SMART rab_sub_5 28 190 - -
Glsi11g0312 191 ProSiteProfiles small GTPase Arf family profile. 21 187 - -
Glsi11g0312 191 FunFam ADP-ribosylation factor 1 11 191 - -
Glsi11g0312 191 NCBIfam small GTP-binding protein domain 26 167 IPR005225 GO:0005525
Glsi11g0312 191 PANTHER ADP RIBOSYLATION FACTOR-RELATED 17 186 IPR024156 GO:0005525
Glsi11g0312 191 SMART sar_sub_1 11 187 IPR006689 GO:0003924|GO:0005525
Glsi11g0312 191 Gene3D - 14 191 IPR027417 -
Glsi11g0312 191 Pfam ADP-ribosylation factor family 15 187 IPR006689 GO:0003924|GO:0005525
Glsi11g0312 191 SMART arf_sub_2 11 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0312 Glsi-ChrGlsi11 2037851 2040023 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0312 11 2037851 2040023 Glsi11g0312 11 2037851 2040023 ECH