Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2118 ATGGTTTCTTCTCTCTCTCAAAAGAAACAATCAGTAAAAACAACTCAGAAGGGAATTGAGGTTTTTAGGGTGTTTTTCCCAGTTAGTGAGCATTTTATTACATTGGAGTGTGTCTGGAAATCAGACAAGTTTGTATTACTAGAGAGAGAGAGGAAGCATAAGAGTGAGAATACAAGTCAAGTTGAGGATTCCGGAGGAGGTTTCTCTGTCCAACCATCAACTGTTAACTACAGAAATATTGAATCTTTTCTTGGGGCTTCTGAAGAAGAAGGCAAAGATATGGTAGAGCTTCTTCGGCAAGTATCACCTCCTGTACAATGTTCTTCTTATCCTCCAATTCGTCGGGAAGTGGCAAGAAAAGCATTGTTTAAGTGCTCATTGGAGCGCCAATTAACAAGTTCAAGTAAGCTTCTGTCCAAGCATGTATTAGCTGGTCTTGCTGCTTCCTTGATATTTATTTCTCCAACAAATCAGCTGTCTGTTGCAGCAGATCTATCTCAACAAAATATATGCCAGCTTGCCAGTGCCGCTAATAATGCAGTTATTCCTCCAATTGATGATGGGTCTAATGAGAAAGGTGGAAATCTCATGATGATGAGAGGTATGACAGCCAAGGATTTTGACCCTATTAGGTATTCAGGAAGATGGTTTGAAGTTGCTTCGCTTAAACGTGGATTTGCTGGGCAAGGTCAAGAAGACTGTCATTGCACTCAGGGTGTGTATACATTTGATAGGGAGACTCTCTCAATCCAAGTTGATACGTTTTGTGTTCATGGAGGACCCAGTGGATATATAACCGGAATAAGGGGAGGGGTTCAATGTCTTTCAGAAGAAGATTTGGAGAAAAAAGAGACAGTGCTAGAAAAGCAAGAAATGATAAAAGGGAAATGCTATCTCCGGTTTCCGACATTGCCATTCATCCCCAAGGAGCCTTATGATGTGATTGCTACTGATTATGACAATTTTTCTCTAGTTTCAGGAGCAAAAGACAGAAGCTTCATTCAGATATACTCAAGGACACCCGTCCCTGGACCTGAATTTATAGAGAAGTATAAAGCTTATTTGGCAAACTTTGGATATGATCCAAGCAAAATCAAAGATACACCCCAAGACTGTGAAGTTATGTCAAATAGTCAGCTAGCAGCTATGATGTCCATGTCTGCCATGCAACAAGCACTAACAAACCAGTTTCCTGATCTAGAATTGAAGGGCTCTATTGAACTTAACCCATTCACAAGTGTATTTGACACTTTGAAGAAGCTTCTTGAGCTTTATTTTAAGAAGTAA 1287 0.4002 MVSSLSQKKQSVKTTQKGIEVFRVFFPVSEHFITLECVWKSDKFVLLERERKHKSENTSQVEDSGGGFSVQPSTVNYRNIESFLGASEEEGKDMVELLRQVSPPVQCSSYPPIRREVARKALFKCSLERQLTSSSKLLSKHVLAGLAASLIFISPTNQLSVAADLSQQNICQLASAANNAVIPPIDDGSNEKGGNLMMMRGMTAKDFDPIRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDRETLSIQVDTFCVHGGPSGYITGIRGGVQCLSEEDLEKKETVLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDRSFIQIYSRTPVPGPEFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSAMQQALTNQFPDLELKGSIELNPFTSVFDTLKKLLELYFKK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2118 428 PANTHER LIPOCALIN 190 373 IPR002345 GO:0036094
Glsi10g2118 428 SUPERFAMILY Lipocalins 203 384 IPR012674 -
Glsi10g2118 428 Gene3D - 202 385 IPR012674 -
Glsi10g2118 428 Pfam Lipocalin-like domain 210 370 IPR000566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2118 Glsi-ChrGlsi10 16252418 16257576 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g2118 10 16252418 16257576 Glsi10g2118 10 16252418 16257576 ECH