Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1970 ATGAGAAATTCGAAGCTTACCCCACCAATTCAGGGGGTCTTCCCAATGGAGCTCTGCAGCGGAAGCTTCAGAACTGTCCTCCATTTAAACCCATCTCGACCTCGTCTCTCTCTCCTTTGTTCCAACTCAGTTTCTCTACAGAATTCTCTTCTTCATACTAAGCCTAGAACCTCCAATTCTTTGAAGCATTCATCTGTCACCCGCCAAATTAAACTCCTTCAACCCTCATTACATCGTGAAAATTCGCATCGACTTACAGTTTCAGCTTCTTCTTCTTCCGTTGCTCTTGACTCCGAGAAAGACCGGCTTCCGGCAGACTTGAATGTCACCGTGACAGAAGAACCCAATTCCAGAGTTAAATTGCGTGTAGAAGTTCCATCTTTGGTCTGTGAGGATTGTTACAAAATGGTCATAGCTGAGTTTATGAAGCAAGCAAAGATCCCTGGCTTTCGCCCTGGAAAGGTTCCAGAGAATATTCTTGTTAATTATGTTGGGAAGAAAAATGTTCAGAAGGCTACAGTTGAATCTATACTGAGAAGGACACTTTCACATGCCATGTTGACGGTTACTGGAAGGGCTTTGCAGGACTCAGTACGTATAGTAACTAAATTTTCTGAGTTGGAGGAGACATATTCTTCTCTTGGGTCTCTCAGATACGATGTCATTGTTGATGTAGCACCTGAAATCAAATGGGTTCCTGAGAATGCATATAAAAATCTGAAGATAGTTGTTGAGATGGATAGTGATATAGATGCTCACAGAGCTTCTGAACAAGAACTAAGAAGGCGCCACAAGTCTATTGGTTCACTAAAAGTTGTTACTGACAGAGGGCTACAGATTGGTGATGTTGCTGTCCTTGACATCTCAGCAACAACAATTGATCAAAATGAATCAAATATTAAAAATATTCCATCTGCTGAAAGTAAAGGGTTTAATTTTGATACTGAAGATGGTGACAAAGTACTACCTGGTTTCCTTGATTCTATTATTGGAATTTGTCGAGGTGAAACGAAGTCATTTCCTCTTGTATTTCCTGAAACATGGAAGCAAGAAAATCTCTGTGGTGTTCATGCTCAATTTACTGTTGAATGCAAAGAACTCTTCTACAGAGATTTACCAGAGTTGGATGATTCTATTGCTGATAAGCTTCTCCCAGGATGCACCACAGTGGAGCAGGTCAAAGAAATATTGTTACAGCGATGCCAAGAAGTGGAGCAGACAGCAAGAGAACAAGCAACTGATAATGCTATCCTGGATCAGCTTTCTAAGATGGTTGAGGTTGATATCCCTCAATCCTTGTTTGAGGAACAAGGTAGACAGCTTTATGGAGCCAAACTGTTAGAAATTCAGGCAAAAGTAAAACTAAATGAGCAGCAGTTGGCTTCTCTATCAAGTCCAAAGGCAGTGAAGGAATATCTTGAACACCAAAAAGACAATATAATAAATTTGATAAAACAGAACCTGGCAGTTGGAGATATATATAAGCGTGAAAATTTGCAGTTTGCTACGGAGGATCTTGTCAAAGAGGTTGAGAATTCCATAGCTGAATTTAAGCGTCAAAAGCAAGAATATGATGAAGAACGGGTGAAGGAACAGGTGCAAGAGATACTAGAAGGAGCTAAGGTGCTTGAATGGTTAAGAGAACATGCAGAGATTCAGTATATTACCAGCTGA 1674 0.405 MRNSKLTPPIQGVFPMELCSGSFRTVLHLNPSRPRLSLLCSNSVSLQNSLLHTKPRTSNSLKHSSVTRQIKLLQPSLHRENSHRLTVSASSSSVALDSEKDRLPADLNVTVTEEPNSRVKLRVEVPSLVCEDCYKMVIAEFMKQAKIPGFRPGKVPENILVNYVGKKNVQKATVESILRRTLSHAMLTVTGRALQDSVRIVTKFSELEETYSSLGSLRYDVIVDVAPEIKWVPENAYKNLKIVVEMDSDIDAHRASEQELRRRHKSIGSLKVVTDRGLQIGDVAVLDISATTIDQNESNIKNIPSAESKGFNFDTEDGDKVLPGFLDSIIGICRGETKSFPLVFPETWKQENLCGVHAQFTVECKELFYRDLPELDDSIADKLLPGCTTVEQVKEILLQRCQEVEQTAREQATDNAILDQLSKMVEVDIPQSLFEEQGRQLYGAKLLEIQAKVKLNEQQLASLSSPKAVKEYLEHQKDNIINLIKQNLAVGDIYKRENLQFATEDLVKEVENSIAEFKRQKQEYDEERVKEQVQEILEGAKVLEWLREHAEIQYITS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1970 557 Pfam Bacterial trigger factor protein (TF) 108 245 IPR008881 GO:0006457|GO:0015031
Glsi10g1970 557 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 61 539 IPR005215 GO:0015031
Glsi10g1970 557 Gene3D - 237 552 IPR037041 GO:0006457|GO:0015031
Glsi10g1970 557 SUPERFAMILY Trigger factor ribosome-binding domain 107 244 IPR036611 GO:0006457|GO:0015031
Glsi10g1970 557 FunFam Chloroplast trigger factor 351 552 - -
Glsi10g1970 557 Hamap Trigger factor [tig]. 107 553 IPR005215 GO:0015031
Glsi10g1970 557 Gene3D - 105 229 IPR036611 GO:0006457|GO:0015031
Glsi10g1970 557 FunFam Trigger factor 107 229 - -
Glsi10g1970 557 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 375 553 IPR027304 -
Glsi10g1970 557 FunFam Trigger factor 271 373 - -
Glsi10g1970 557 SUPERFAMILY FKBP-like 272 376 - -
Glsi10g1970 557 Pfam Bacterial trigger factor protein (TF) C-terminus 389 546 IPR008880 GO:0006457|GO:0015031
Glsi10g1970 557 Gene3D - 266 373 IPR046357 GO:0003755
Glsi10g1970 557 NCBIfam trigger factor 118 546 IPR005215 GO:0015031
Glsi10g1970 557 Coils Coil 507 534 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1970 10 13965377 13975312 Glsi10g1970 10 13965377 13975312 ECH