Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1926 ATGAAACTTCTGCTCTTACGGCGCTCCCTCACTTCCCCCTTATATAATACGACTTCCTCGTTTCTCACTACAACTCCAAGTCAATTCTCTCCTCTCTTTCTTCTCCACCCAAAGAACCTATCTCTCAACGCTTTCCATTCAATGGCTACATGTGTCGACGCTTCAAGGGCAGGCATAAACGAAGCCAACCCCCTTTCCCGAAACCCAAACAAGTCCCAGACCGAAGATCATTCCTGCAACTATGTAAAATTCTACCGACCCACTTTCTCCGATCGTGGTCCCTCCATACCCATTTGTAAGAATCGGCCGAAGAATTTCCACACGCGCCCGGTTCTGGAGGACGTTGAGCAGGAAGAGGTTCAAGAAGTAGACGATCTCTGGGTGAGGATGCAGGACGAAGCAAGGTTAGATGTGGATCAAGAGCCGATTTTGTCTAGTTACTATTACAGTTTGATTTTGTCTCATAAATCGTTGGAAGCCGCCTTGGCGAATCATCTATGTGTCAAATTGAGCAGCCCGAGTCTTCCCAGCGGAACCCTATTCGATCTCTTCGTGGGCATTTTGACAGAAGATGAAGAAATCATGGGAGCTGTGAAGAATGATCTACGAGCAGTGAAAGAAAGAGACCCCGCTTGCATAAGCTATGTGCATTGCTTCTTAAATTTCAAAGGTTTTCTGGCATGCCAAGCTCATAGGGTGGCTCACAAATTGTGGTCTCAGGGCAGAACAATTTTAGCCCTTCTGATTCAGAACAGAGTTTCTGAAATTTTGGCAGTAGATATTCATCCAGGGGCGAAGATTGGAAGTGGGATATTGCTGGATCATGCAACTGGGCTGGTAGTCGGAGAAACGGCGGTGATAGGGAACAATGTATCAATTCTCCATAATGTGACGTTGGGAGGAAGTGGTAAGGTTTCTGGAGATAGGCATCCAAAGATTGGTGATGGGGTGCTGATAGGTGCAGGAACTTGTATTTTGGGGAATATAAAGATTGGGGATGGGGCTAAGATTGGTGCTGGTTCAGTGGTGCTGAAGGATGTGCCTCCAAGGACTACCGCAGTTGGTAACCCAGCTAGATTGGTGGGAGGCAAGGACAACCCTATTAAGCTCGACAAGATTCCTAGCTTCACCATGGACCATACTTCTCATATTTCTGAGTGGTCTGACTATGTTATTTAG 1179 0.4665 MKLLLLRRSLTSPLYNTTSSFLTTTPSQFSPLFLLHPKNLSLNAFHSMATCVDASRAGINEANPLSRNPNKSQTEDHSCNYVKFYRPTFSDRGPSIPICKNRPKNFHTRPVLEDVEQEEVQEVDDLWVRMQDEARLDVDQEPILSSYYYSLILSHKSLEAALANHLCVKLSSPSLPSGTLFDLFVGILTEDEEIMGAVKNDLRAVKERDPACISYVHCFLNFKGFLACQAHRVAHKLWSQGRTILALLIQNRVSEILAVDIHPGAKIGSGILLDHATGLVVGETAVIGNNVSILHNVTLGGSGKVSGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLVGGKDNPIKLDKIPSFTMDHTSHISEWSDYVI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1926 392 CDD LbH_SAT 259 357 IPR045304 -
Glsi10g1926 392 PANTHER SERINE ACETYLTRANSFERASE 108 392 - -
Glsi10g1926 392 FunFam Serine acetyltransferase 260 386 - -
Glsi10g1926 392 Gene3D serine acetyltransferase, domain 1 110 259 IPR042122 -
Glsi10g1926 392 SUPERFAMILY Trimeric LpxA-like enzymes 125 362 IPR011004 -
Glsi10g1926 392 Pfam Serine acetyltransferase, N-terminal 126 230 IPR010493 GO:0005737|GO:0006535|GO:0009001
Glsi10g1926 392 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 319 347 IPR018357 GO:0016740
Glsi10g1926 392 SMART SATase_N_2_a 126 230 IPR010493 GO:0005737|GO:0006535|GO:0009001
Glsi10g1926 392 NCBIfam serine O-acetyltransferase 198 359 IPR005881 GO:0005737|GO:0006535|GO:0009001
Glsi10g1926 392 Gene3D Hexapeptide repeat proteins 260 378 - -
Glsi10g1926 392 Pfam Bacterial transferase hexapeptide (six repeats) 310 344 IPR001451 -
Glsi10g1926 392 FunFam serine acetyltransferase 1, chloroplastic 110 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1926 Glsi-ChrGlsi10 13453422 13454600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1926 124 382 Miscellaneous Gene Families AT2G17640 52.896 6.48e-91 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1926 10 13453422 13454600 Glsi10g1926 10 13453422 13454600 ECH