Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1913 ATGGCGCCCACAGGCGCTTTTGCTTTTGTAGCTGCCATCTTCGTCTCAGTCGGGCTTTCCTACGTCATCTGCGACCGTCGCTTTAGATCTCCATCCAAAAAGACCCGCTTGCCTTCGTCAAAGAAGAAATCAAGGAAGGGACTTATTGATGCCATTGGTAACACACCTTTAATTCGAATTAACAGCCTCTCTGAAGCCACTGGTTGCGAAATTCTTGGAAAGTGCGAGTTTTTGAACCCAGGAGGGAGCGTGAAAGATCGAATTGCAGTGAAAATTATTGAAGAGGCTTTATCAACTGGCCAGCTACGTCCAGGTGGAATTGTTACTGAAGGAAGTGCTGGAAGCACGGCCATTAGCCTTGCCACTGTCGCTCCTGCCTATGGATGCAAATGTCATGTGGTTATCCCAGATGATGCTGCCATTGAAAAGTCCCAGATAATTGAAGCCCTAGGAGCTACTGTTGAAAGAGTTCGGCCTGTGTCAATTACTCACAAAGACCATTTCGTCAATATTGCAAGAAGACAAGCATCAGAAGCAAATGTGTTTGCATCAGAGCATAGAAAAAATTTGCAATTGAGTGGGAGGAACATAGAACAAATGAATGGTTACAGATCTGAAGGAGATAGTCACAGCTCAGTTTTTTCCATTGATTGTCAAGGCGGTTTCTTTGCTGACCAATTTGAGAATTTGGCTAACTTCAGGGCCCACTATGAGGGTACAGGACCTGAGATTTGGGAACAGACGAATGGAAATTTGGATGCATTTGTTGCAGCAGCGGGCACTGGTGGCACTGTGGCTGGTGTTTCTAGGTTTCTCCAGGAAAAGAATCCAAACATCAAGTGCTTCCTCATAGATCCTCCTGGTTCTGGTTTGTTTAATAAGGTAACAAGGGGGGTGATGTACACCAAAGAGGAGGCGGAAGGAAGAAGACTCAAGAATCCATTTGACACAATAACAGAAGGAATTGGAATTAACAGGATAACACAGAATTTTATGATGGCCAAACTTGATGGGGCTTTTCGAGGCACAGATATGGAGGCTGTTGAAATGGCTAAGTTTCTTTTGAAGAATGATGGACTATTTCTTGGGAGTTCTTCAGCAATGAATTGTGTTGGAGCAGTTAGAGTAGCACAGTCAATTGGCCCTGGTCATACCATTGTAACCATTCTCTGCGACAGTGGAATGAGACATTTGAGCAAGTTCCATAATTCCCAATACTTGTCTCAGCTTGGCTTGACGCCCAAAGCAGCTGGATTAGAGTTTCTGGGTATCAATTGA 1278 0.4444 MAPTGAFAFVAAIFVSVGLSYVICDRRFRSPSKKTRLPSSKKKSRKGLIDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRIAVKIIEEALSTGQLRPGGIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRQASEANVFASEHRKNLQLSGRNIEQMNGYRSEGDSHSSVFSIDCQGGFFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGVSRFLQEKNPNIKCFLIDPPGSGLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITQNFMMAKLDGAFRGTDMEAVEMAKFLLKNDGLFLGSSSAMNCVGAVRVAQSIGPGHTIVTILCDSGMRHLSKFHNSQYLSQLGLTPKAAGLEFLGIN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1913 425 Gene3D - 82 233 IPR036052 -
Glsi10g1913 425 PANTHER CYSTATHIONINE BETA-SYNTHASE 46 407 - -
Glsi10g1913 425 CDD CBS_like 53 399 - -
Glsi10g1913 425 FunFam Cysteine synthase 234 398 - -
Glsi10g1913 425 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 74 92 IPR001216 GO:0006535
Glsi10g1913 425 Pfam Pyridoxal-phosphate dependent enzyme 50 392 IPR001926 -
Glsi10g1913 425 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 45 403 IPR036052 -
Glsi10g1913 425 Gene3D - 52 398 IPR036052 -
Glsi10g1913 425 FunFam Cysteine synthase, putative 52 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1913 Glsi-ChrGlsi10 13365851 13369852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1913 52 399 Miscellaneous Gene Families AT3G04940 29.429 5.74e-34 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1913 10 13365851 13369852 Glsi10g1913 10 13365851 13369852 ECH