Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1889 ATGGCCGGGGGAGTCGAGACTGGAATTGATCAACCTCAATCATATGACAAACAAAAGGTTGACATTACTACTGTCGTCACAGATGAACGTGAGATAAACGATAGTCCGATCGAGCAAGTGAGGTTGACGGTTCCGATCAGCGACGACCCGAGAGAGCCAGCACTAACATTTCGAACATGGGTTCTGGGGACGATGTCGTGCATTATCCTTGCGTTTGTGAATCAATTTTTCAGCTACAGAACGAACCAGTTGTTTGTTTCTTCTGTGTCAGCTCAAATTCTGAGCCTCCCAATTGGGAAGCTAATGGCTGCGACTCTGCCTACAAAACCAATCAAAATCCCACTCACCAAGTGGTCTTTTTCGCTGAATCCTGGGCCTTTCACTTTGAAAGAACATGTGCTGATCACCATGTTTGCCAGCTCTGGATCTGCCGGTGTTTATGCCATTGGCATAGTCAACATTGTTAAGGCTTTCTATCGTAGGGATATCCATCCAATGGCAGCTTATTTGCTGGCCATAACAACCCAGATGATTGGGTATGGATGGGCTGGGGTGTTTCGAAAATTCCTCGTCGACTCCCCTTACATGTGGTGGCCTTCGAACCTTGTGCAGGTGTCTCTCTTCAGGGCATTTCACGAGAGAGAGAAAAGGCCTAGAGGGGGAAGCACAAGGCTACAATTCTTCTTCCTGGTCTTCGTGGCAAGCTTTGCCTATTACATCATTCCTGGCTATTTTTTCCAATCTATCACAACCATATCCTTTGTTTGCTTGATTTGGAAGAACTCCATCACTGCCCAACAAATTGGTTCGGGCAGGTCTGGCCTTGGCATTGGCTCATTCACCCTTGATTGGAACACAGTGGCTAGCTTCTTGGGCAGCCCTTTGGCTGTCCCTGGCTATGTCATTATCAACATGTTGATGGGGTTTGGATTGTTTCTCTATGTTTTGATCCCCATTGCCTATTGGTCTAATGCCTTTGAAGCCAAGAAGTTTCCCCTCTTTAGCTCTCACACATTTGACTATTCTGGTGCAAAATATAATGTTTCCAGAGTTCTGAATGAAGCCAATTTTGACATTGATTTGAATAGTTACAACAATTACAGCAAACTGTATTTAAGCGTCTTGTTTGCCTTCAACTATGGCTTGAGCTTTGCAAGTCTTACTGCTACCATTTCACATGTTCTCCTCTTCCATGGAAAAACAATATATCAGCTGTGGAAGAAGACAAGTGCAGTGAAAGATCAGCTAGCAGATGTGCATACAAGAATTATGAAGAAGAACTACGAACAAGTCCCGCAATGGTGGTTTATTCTTATTTTGGTTACAATGGCTGGTCTTTCCTTCTGGGCCTGTGAAGGCTTTGGAAAGCAGCTCCAACTCCCATGGTGGGGAATCATATTGTCTTTTGCCATTGCATTTGTCTTCACCTTGCCTATTGGGGTCATTCAAGCCACAACAAACATACAAACAGGACTGAATGTGATCACAGAGTTAATAATAGGGTACTTGTACCCAGGAAAGCCCCTCGCAAATGTAACTTTCAAGACTTATGGGTATATTAGCATGACACAAGCACTTTACTTTCTTGCTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCAAAATCTATGTTCATCGTGCAGTTGGCTGGCACAATAGTTGCCTCAGTTGCATACTTCGGCACAGCATGGTGGCTCCTCACAACAGTTGAGAATATATGTGATGCATCCTTATTACCAGATGGGAGTCCATGGACTTGCCCTGGAGATGAAGTGTTCTACAGTGCTTCAATCATATGGGGAGTCATAGGTCCACAAAGAATGTTCACAAGCGAGGGTGTTTACCCTCAGATGAACTGGTTCTTCCTCATTGGCCTTGTGGCCCCTCTTCCAGTTTGGCTCCTTTCGCGCCTATTCCCAAACCAAAAATGGATTCCCCTCATAAATATGCCCATTATCTTTGGAGGTGCAGGGGGATTGCTTCCAGCAAGATCTATCAACTATCTTTCTTGGGCAGTGGTGGGAATTTTCTTCAATTTCTATGTTTATAGGAACTTCAAGAAATGGTGGGCTAGACATACCTATATTCTCTCTGCCGCCCTTGATGCTGGGATTGCTTTTATGGGTGTGCTTCTATTTTTCTCTCTCCAAACTTACGATATTTTGGGTCCAAACTGGTGGGGATTGGATAGTGATGACCATTGCCCTTTGGCAAGGTGCCCTACAGCTCCAGGGCTGCAAGTCAGCGGTTGCCCTACTTTCTGA 2268 0.448 MAGGVETGIDQPQSYDKQKVDITTVVTDEREINDSPIEQVRLTVPISDDPREPALTFRTWVLGTMSCIILAFVNQFFSYRTNQLFVSSVSAQILSLPIGKLMAATLPTKPIKIPLTKWSFSLNPGPFTLKEHVLITMFASSGSAGVYAIGIVNIVKAFYRRDIHPMAAYLLAITTQMIGYGWAGVFRKFLVDSPYMWWPSNLVQVSLFRAFHEREKRPRGGSTRLQFFFLVFVASFAYYIIPGYFFQSITTISFVCLIWKNSITAQQIGSGRSGLGIGSFTLDWNTVASFLGSPLAVPGYVIINMLMGFGLFLYVLIPIAYWSNAFEAKKFPLFSSHTFDYSGAKYNVSRVLNEANFDIDLNSYNNYSKLYLSVLFAFNYGLSFASLTATISHVLLFHGKTIYQLWKKTSAVKDQLADVHTRIMKKNYEQVPQWWFILILVTMAGLSFWACEGFGKQLQLPWWGIILSFAIAFVFTLPIGVIQATTNIQTGLNVITELIIGYLYPGKPLANVTFKTYGYISMTQALYFLADFKLGHYMKIPPKSMFIVQLAGTIVASVAYFGTAWWLLTTVENICDASLLPDGSPWTCPGDEVFYSASIIWGVIGPQRMFTSEGVYPQMNWFFLIGLVAPLPVWLLSRLFPNQKWIPLINMPIIFGGAGGLLPARSINYLSWAVVGIFFNFYVYRNFKKWWARHTYILSAALDAGIAFMGVLLFFSLQTYDILGPNWWGLDSDDHCPLARCPTAPGLQVSGCPTF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1889 755 PANTHER ISP4 LIKE PROTEIN 29 753 IPR004648 GO:0055085
Glsi10g1889 755 Pfam OPT oligopeptide transporter protein 55 716 IPR004813 GO:0035673
Glsi10g1889 755 NCBIfam OPT family oligopeptide transporter 39 718 IPR004813 GO:0035673
Glsi10g1889 755 NCBIfam small oligopeptide transporter, OPT family 33 720 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1889 Glsi-ChrGlsi10 13217180 13220754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1889 16 755 Organic Solute Cotransporters AT5G55930 66.667 0.0 1038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1889 10 13217180 13220754 Glsi10g1889 10 13217180 13220754 ECH