Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1888 ATGAGCGGCGGTGGTGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAAAACCATTCAAGACATTAGGGAAATCACCGGCAAGCAGCACAGCGACGATGAAATCTACGCCGTCCTCAAGGAATGCTCTATGGATCCCAATGAGACCGCTCAGAAGCTTTTGTATTTAGATACTTTTCATGAGGTAAGAAGGAGGCGTGACCGGAAGAAGGAGACTGCTTTTGGGGCTGAATTTGTCTGGTTGCACCATTGCAGCAAGTATCTGACTCCTGTGTGTGGCTCTGTTTATGGCTTGAGCAGCAAGGCTTCTGAGGATTTTAGGTCAAAGCAAGCCGGACAAGGGAGAGGGGGAAGGGGTGCTTCAGGGGGCTATTCTGCTAAATTTCCTGGTACAATTTTGCCTCTGTCTAAAGGCATGACACTGGCTCTGTTTTGCTATTCCTTCTTATCTATTTATGATGACAACCATTTCCATACAAGGTCATCTGGAAAGTGGAAACCAACACTTCCCAGAATAAAATGTATTCATGGATATGGTGCTGGTGCGAGGAACTCTGCTATTCGTGGGGAAAATGGATTCAGTCACATTTCAGAGAGAGGTCAAGCACCCTCTACTCGGCCAGTTTTGCCAAAAACAAAAAATAGCGCAGCCTCTCAATCCCTAAGAGTTTCAGCTGTTGCCCCTAATGGTCATGCAAATCAATTCAATGGGAATTCTGGTGCTGCTGATGGCCAAGCTCTCGTGGATAGTGTTATGAGTGTCTCTAAAAGCAGTTCAGCTATTGATGGCATTAGCAAACAAGAAGATGTTGAGCATCAAGCTGCTGTAGTTGCTGTATCTTCCCCTACTCAGACCTTTGGGTCAATTAACAGAGTTGACAAAGGAAAGTCCCTACCAAGTCCTGATCAGTTTTCAGCTGCTTCTGCACCTGGTGTTGATCCCGCCGTTGGTGGTGCAAATGCAATTAATGGGGAAGTTGGGAGCCAATGGATAGCTGCTGGAGTAAATCATGTCAAAGGAAACAAAGTTGTTCTCTCTGATGTTGGTGAATCACTAGCATCCAAGGGAGAACAATATGGGTCTTTGAATTCAACAAGCAAAATGATGACCCCCAACAAATCAAATGAAGTTGAAAAGAACCAGTTCTCTGAGACCTCACAGCCCTTCTCTTCATTGTATAATGGTTCATTAATGTCATCTTCCATTTGTTCTAGCCAGCTACCTCCAGCAGTCAATGTCTCAGAGGTTTCAACTTCTGAAGTATGTGCGCAATCGTCGTCGGCTGGGTTGAAGCAACATGTTACTTTTCCAAATCATTTTCAAGTACCTGAGGCTTTAAAAAATGGTCTGACATTTGGAAGCTTTGATTCTAATTTGGGTCAGAAAGAAAGATCTAGCAGTGGAACTGGTGGTGACAATAATACTTCGCCTGCTCTTGAATCTTCTCTAGGGAGTGATGAAACTGCTACTTCTAGTAACCAAAGTGCATCATCACCTGGACATGGAGATCATCCTGATTATCCACATACTTCATCTTTCTGGAATGAAATGACCCCACCTTTAGAAGGCAATGCTATCGCTAGTACTGACTCAAAAGGCGATCAGCCAAAGCAGGAGGTATTGACTCCAGAGGGCCCTCCAATTTCAACAGTTCAAAATGCTCAGAACTGTGGTTTGAATTTCATGTCCACCATATTAGGGACTCAACAATTTCAACTTGAGGCAGCTGAGCCTCAAGCCCAAGAAACATCTGCTCTTCCAAACTTTGTTGGTACAAATTCTCAGACTACATCTAGCCCTAGTCCAACTCCACCTCTGCAGAGTTCTATACATTTATCTCCACAACCAGTTTCTATTTTCAGGCCACCTTACCCTAGTAACTTCTTCCCTTATGGCCACTATTACCCCCCAATTTATGTATCGCCAATACACCAATTTTTGAGCCACAATGGCTTCCCTCAACAGCCATCAGCTGGCAACTTGTATTTACCAGCAGCAGCTGGGGTCAAATTCCCTCTACCCCAATTTAAGGCGGGAACAACCACGGGAAACATGGCTCATATTGGAATACCTTCTGGATCATTTATTTCCCCTCCTGTTGGATATGCTCCTAGTCCGACAATGAATACTGGAAGCTCACCTGGAAATGAAGATCTTGCAGTATCTCAGTTAAAGGAAAACCATATCTATACAACTGGACAGCTGAGTGAAGGTTCAGCCGTGTGGATACCTTCACCAGGCCAAGATATATCCAGCTTGCAAGTGAATTCTCTGTATAACCTTGCTCCTTCAGGACATCTTGCTTTCCCCCCAACACAGGCAGGTCGTGGTGCATTTGCTGGTATCTATCAACCAGGTCAAGCAGTAGCTTCACATACAACTCTTCTGCAACAGTCTCAGGCAGTGGCTGGAGCCGTTGAAACAGTAGGACCCCCTTCAGGTGCTTACCAGCAGCCACAACATGCACAGATCAATTGGAATTCTAATTTTTAG 2493 0.4497 MSGGGGSRVPIPNNVRKTIQDIREITGKQHSDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDRKKETAFGAEFVWLHHCSKYLTPVCGSVYGLSSKASEDFRSKQAGQGRGGRGASGGYSAKFPGTILPLSKGMTLALFCYSFLSIYDDNHFHTRSSGKWKPTLPRIKCIHGYGAGARNSAIRGENGFSHISERGQAPSTRPVLPKTKNSAASQSLRVSAVAPNGHANQFNGNSGAADGQALVDSVMSVSKSSSAIDGISKQEDVEHQAAVVAVSSPTQTFGSINRVDKGKSLPSPDQFSAASAPGVDPAVGGANAINGEVGSQWIAAGVNHVKGNKVVLSDVGESLASKGEQYGSLNSTSKMMTPNKSNEVEKNQFSETSQPFSSLYNGSLMSSSICSSQLPPAVNVSEVSTSEVCAQSSSAGLKQHVTFPNHFQVPEALKNGLTFGSFDSNLGQKERSSSGTGGDNNTSPALESSLGSDETATSSNQSASSPGHGDHPDYPHTSSFWNEMTPPLEGNAIASTDSKGDQPKQEVLTPEGPPISTVQNAQNCGLNFMSTILGTQQFQLEAAEPQAQETSALPNFVGTNSQTTSSPSPTPPLQSSIHLSPQPVSIFRPPYPSNFFPYGHYYPPIYVSPIHQFLSHNGFPQQPSAGNLYLPAAAGVKFPLPQFKAGTTTGNMAHIGIPSGSFISPPVGYAPSPTMNTGSSPGNEDLAVSQLKENHIYTTGQLSEGSAVWIPSPGQDISSLQVNSLYNLAPSGHLAFPPTQAGRGAFAGIYQPGQAVASHTTLLQQSQAVAGAVETVGPPSGAYQQPQHAQINWNSNF 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1888 830 SUPERFAMILY UBA-like 11 72 IPR009060 GO:0005515
Glsi10g1888 830 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 829 IPR044277 -
Glsi10g1888 830 MobiDBLite consensus disorder prediction 290 310 - -
Glsi10g1888 830 MobiDBLite consensus disorder prediction 457 551 - -
Glsi10g1888 830 MobiDBLite consensus disorder prediction 588 608 - -
Glsi10g1888 830 MobiDBLite consensus disorder prediction 511 536 - -
Glsi10g1888 830 MobiDBLite consensus disorder prediction 457 500 - -
Glsi10g1888 830 Pfam GBF-interacting protein 1 N-terminal 11 71 IPR009719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1888 Glsi-ChrGlsi10 13207303 13214984 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1888 10 13207303 13214984 Glsi10g1888 10 13207303 13214984 ECH