Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1866 ATGACAGTGGGAGCTGGGATTTCTGTGGCGGATGGCAACTTGATGGTCTTGGGGAAGAAGGTGCTGAGTCAGGTTCATGAAAACGTCGTTGTCACGCCAGCATCTTCAACCGGGGCTTTGCTCAATGGGGCATTCCTTGGAGTTTCTTCTGATCAGAAGGGCAGCCGAAGAGTCTTCCCCATTGGAAAACTACAGGGGTTGCGGTTTATGTGTGTTTTCCGCTTCAAAATGTGGTGGATGACACAGAGAATGGGTACTTGCGGGCAAGAAATTCCCTTTGAAACACAGTTCTTGCTTGTTGAAACACACAATAGTTTTGATATTGATGGGGGAATCAGTAACGGAGGAGAACAATCTGCCACCTATGCTGTTTTCTTACCCCTTCTGGAAGGAGATTTCAGAGCCGTTCTTCAGGGAAATGAACAAAACGAGATAGAAATCTGTGTGGAAAGTGGATGTCCTGCTGTTGAAGAATTTGATGGGACTCATCTGGTGTTCATAGGAGCTGGATCAGACCCATTTGAAGTCATCACTAATGCTGTCAAGACCGTTGAGAAACACTTGCAGACATTTTCTCACCGTGAGAGGAAGAAGATGCCAGACATGTTGAACTGGTTTGGCTGGTGTACATGGGATGCATTCTATACTAAAGTCAATTCAGAAGGTGTAAAACAAGGATTAGAGAGCTTAGAGAAAGGTGGAATTCCTGCTAAGTTTGTCATAATTGATGATGGATGGCAATCTGTTGCCATGGACCCTAATGGTATTGAATGGAAAGCCGATAATGCTGCCAATTTTGCAAATCGTTTAACGCATATCAAAGAGAATTACAAGTTTCAGAAAGATGGCAAAGAGGGTCAGATAGTAGAGGATCCTGCTCTGGGACTTCGTCATATTACCAATGACATCAAAGAACAGCATGCCATAAAGTACATTTATTTGTGGCATGCTATAACAGGATACTGGGGTGGTGTTAAACCTGGTGTTACTGGAATGGAGCACTACGAGTCAAAGATGGCCTACCCAGTTTCATCTCCTGGAGTTGAATCCAATGAACCAGACGAAGCTCTAACAACCATTGCTATGAATGGGCTTGGCCTTGTGAATCCTGAGAAAGTTTATCACTTCTACGATGAACTCCACTCCTATCTCGCATCTGCTGGTATCGATGGTGTCAAAGTCGATGTTCAGAATATCCTTGAAACTCTTGGGGCAGGCCATGGTGGTAGGGTGAAACTTGCAAGAAAATACCACCAGGCATTAGAGGCTTCAATCTCAAGGAATTTCCCTGATAATGGGATTATTTGTTGCATGAGTCACAATACAGATGGATTGTACAGTGCAAAGAGGTCAGCCGTTATTAGGGCATCAGATGATTTCTGGCCAAGAGATCCAGCATCTCACACAATTCACATAGCATCAGTTGCTTACAACACTATCTTCCTTGGTGAATTTATGCAGCCAGATTGGGATATGTTTCATAGCCAACATCCGATGGCTGAATATCATGGTGCAGCTCGAGCAGTAGGAGGATGTCCTATTTATGTCAGTGACAAGCCTGGGCACCATGACTTTAATCTTCTGAAGAAACTTGCACTTCCTGATGGTTCTATATTGAGGGCTAAACTTCCAGGAAGACCAACAAAGGATTGCTTATTTTCTGATCCTGCTAGAGATGGAAAGAGTCTTCTGAAGATATGGAACATGAATGATTTTTCTGGAGTTGTTGGGGTGTTTAACTGCCAGGGAGCTGGGTGGTGCAAAGTTGGAAAGAAGAACCTTATCCATGATGAGAATCCAGGAACAATCACTGGTGTCATTAGGGCAAAGGATGTTGACTATTTGTCCAAGGTTGCAGATGATAAATGGACAGGAGACTCCATTATCTTTTCCCATGTTGGTGGAGAGGTTATTTACCTTCCAAAGGATGCATCTATTCCTATTACGTTGAAATCCAAAGAATATGAAGTTTTCACAGTAGTTCCTGTTTGGGAATTAGACAATGGTGTCAAATTTGCTCCTATTGGTTTAACCAAGATGTTCAACTCAGGAGGAGCCATCAAAGATTTGAACTGTAGATCAAATGACACTGTTAATGTTGTCATGAAAGTTAGAGGTTGTGGTCTATTTGGAGCTTATTCATCTGCTCGACCTAAGATGGTGACAGTGGATTCAGAACAGGTAGAGTTCAGATACGAGGAAGGATCTGGGTTGGTGACCATTAATTTGAGAGTACCAGAGAAAGAATTGTATCAGTGGAATATATCTATAAACTACTAA 2280 0.4281 MTVGAGISVADGNLMVLGKKVLSQVHENVVVTPASSTGALLNGAFLGVSSDQKGSRRVFPIGKLQGLRFMCVFRFKMWWMTQRMGTCGQEIPFETQFLLVETHNSFDIDGGISNGGEQSATYAVFLPLLEGDFRAVLQGNEQNEIEICVESGCPAVEEFDGTHLVFIGAGSDPFEVITNAVKTVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTKVNSEGVKQGLESLEKGGIPAKFVIIDDGWQSVAMDPNGIEWKADNAANFANRLTHIKENYKFQKDGKEGQIVEDPALGLRHITNDIKEQHAIKYIYLWHAITGYWGGVKPGVTGMEHYESKMAYPVSSPGVESNEPDEALTTIAMNGLGLVNPEKVYHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSQHPMAEYHGAARAVGGCPIYVSDKPGHHDFNLLKKLALPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNMNDFSGVVGVFNCQGAGWCKVGKKNLIHDENPGTITGVIRAKDVDYLSKVADDKWTGDSIIFSHVGGEVIYLPKDASIPITLKSKEYEVFTVVPVWELDNGVKFAPIGLTKMFNSGGAIKDLNCRSNDTVNVVMKVRGCGLFGAYSSARPKMVTVDSEQVEFRYEEGSGLVTINLRVPEKELYQWNISINY 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1866 759 Pfam Raffinose synthase or seed imbibition protein Sip1 7 742 IPR008811 -
Glsi10g1866 759 FunFam Probable galactinol--sucrose galactosyltransferase 1 203 530 - -
Glsi10g1866 759 Gene3D Aldolase class I 200 531 IPR013785 -
Glsi10g1866 759 PANTHER - 1 756 IPR008811 -
Glsi10g1866 759 SUPERFAMILY (Trans)glycosidases 200 531 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1866 Glsi-ChrGlsi10 13002580 13007263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1866 1 758 Glycoside Hydrolase AT1G55740 73.553 0.0 1129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1866 10 13002580 13007263 Glsi10g1866 10 13002580 13007263 ECH