Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1822 ATGGTGTGGGGCCTCTTCCCTGTCGATCCTCTTTCAGGAGAGGATAAGTACTACATCTTTAGATGTGGAATTTACAAAATTGGTCGAAAAGGTTGTGATGTGATAATCACTAAAGATAAAGGGGTATCTCGGGTTCACGCAGAAATAGTCGTTAATGCAATGCCCGCCATGTCACCCGATGTACAGATTAGAGATTGCTCTAAGTATGGAACATTTATTAGCAAGAATGTTGAGCCCAGGAAAAAAGTTCATGAGCTACCAAACAAAGAAACAACACTAGAGGATGGTGACCTTGTTTCTTTTGGTACTGGTAGTGCAACCTACAGGTTTTGCCATGTCCCACTAGTTTTCTTCATCTGTTCCTCGGATAAAGTGGATCAATCTCTTGAAGAGAAAGTTTCATTGATTGGTGGTCGTATTACTAATACATTAGTTCAAGAGTGCACACATGTACTGGTGGAACAAAATATGCCTTTGAAGAATGACCTTATCGATGCTGTTGTGGCCAAGAAACCTTTTGTTCTCAAAACTTGGGTAGAGTTTCTTGCAGAAAAGAACATTGGCACTGAAATTCCTAGCTGTAACTCCTATGTTCCAACATTGGCAGTGGAAGGAGCATCAGTCAGATTTGCTGACCCTAAAGCTCGTGAACACTGCTTAAAGGGATATACTTATTTGTTGGAATCATTGCACTTGTACAAATTTGGGGCTAAGTTAAAATCTTTATTGGAAGTGGGTGGTGCAAAAGTTGTTGCTTTTGAAGAATTTTGTTCGAATAGCCAAGGCTCAAATTATGGAGATGATAATCGTGTGGTTTGTGTCATCCCAGGAGGACCGGCATGCAAGTCTGATCGCTTCAATAAACTTAGTTCCTTGTCCAGAGTGAATGAGATGGATGTAGTATGTGCTGCTTTAAGTGGACAGCTAGATCTGTCTATATTGATATCGCCATGTGTACTTGTTTCATCTTCATGCTCTACAGATGAGACAGTAGTAGCAGATTCCGATACTGACGTTGAAACAGCCACATCAGCCCATGCAAGTATGACATTGTGCAAAGGAGATAATATAAAATATGAAAAAACAGAAATATCATTAGATGATGCTCCTGCCAGATTTGATAAAATGAAACATGAAAGAATGGAGACAACCTTGGATGATGTTTCTACTGGATTGGATGAGAAAAAACATGCAAAAACTGAAACATCCTTGGATTATGTTTCTTCCAGATTGGATACCCATTCTACCAGCTTCGGGGAAGCTAGAGATGGTATGACGGTGAGGAAAGACAAAGTTGATGATTCTGAAAGTAGAAACTCAGATATTGTTTACAGCCAAGATTTAGTTGTCCGAGATATAAACATACCTTCTACCATAAATGCTGCACCAGACAGCAATGTTCCAAATTTCAAACGCTTTAGAAAGGTACATACTCAGTCTGGGAATAGTTTCTACGATCTTGTTCCATTTGCAAAATATCCATACAAAGACTCTGATTATGGGAATGAGGAGGTAAATAAGTCTCTAAAGGAGGAGAAAAAGCGAAAGCAAATGGAAGCTATTGCAGAAGACTTATTTAATAATGAGAAGGCAAGAAAGCGTGGCGCAGCTGGTTCTCTTCGTGGCATTCTTATTTCATGA 1641 0.3955 MVWGLFPVDPLSGEDKYYIFRCGIYKIGRKGCDVIITKDKGVSRVHAEIVVNAMPAMSPDVQIRDCSKYGTFISKNVEPRKKVHELPNKETTLEDGDLVSFGTGSATYRFCHVPLVFFICSSDKVDQSLEEKVSLIGGRITNTLVQECTHVLVEQNMPLKNDLIDAVVAKKPFVLKTWVEFLAEKNIGTEIPSCNSYVPTLAVEGASVRFADPKAREHCLKGYTYLLESLHLYKFGAKLKSLLEVGGAKVVAFEEFCSNSQGSNYGDDNRVVCVIPGGPACKSDRFNKLSSLSRVNEMDVVCAALSGQLDLSILISPCVLVSSSCSTDETVVADSDTDVETATSAHASMTLCKGDNIKYEKTEISLDDAPARFDKMKHERMETTLDDVSTGLDEKKHAKTETSLDYVSSRLDTHSTSFGEARDGMTVRKDKVDDSESRNSDIVYSQDLVVRDINIPSTINAAPDSNVPNFKRFRKVHTQSGNSFYDLVPFAKYPYKDSDYGNEEVNKSLKEEKKRKQMEAIAEDLFNNEKARKRGAAGSLRGILIS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1822 546 ProSiteProfiles BRCT domain profile. 129 179 IPR001357 -
Glsi10g1822 546 Gene3D - 4 112 - -
Glsi10g1822 546 PANTHER NIBRIN-RELATED 2 400 IPR040227 GO:0006302|GO:0007095|GO:0030870
Glsi10g1822 546 CDD BRCT 115 180 - -
Glsi10g1822 546 CDD FHA_NBN 3 112 - -
Glsi10g1822 546 Pfam FHA domain 25 102 IPR000253 GO:0005515
Glsi10g1822 546 SUPERFAMILY SMAD/FHA domain 10 112 IPR008984 GO:0005515
Glsi10g1822 546 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 78 IPR000253 GO:0005515
Glsi10g1822 546 FunFam Nibrin 5 111 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1822 10 12625823 12634338 Glsi10g1822 10 12625823 12634338 ECH