Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1784 ATGGCTTCTGCACCAGCCTTGAAGCGCACCGACTCCATTGCAGATAACATGCCTGATGCATTGCGTCAGAGTAGGTACCATATGAAGAGGTGCTTTGCTAAGTACCTTGAGAAGGGGAGAAGGATCATGAAACTTCACCATTTGATGGAAGAAATGGAGCAAGTTATAGATGACAAGAGCGAAAGAAACCAAATATTGGAGGGCCCTCTTGGCTTCATATTGAGTTCTACACAGGAAGCTGTGGTTAATCCACCACATGTTGCCTTTGCAGTAAGGCAAAATCCTGGAGTTTGGGAATTTGCTAAAGTGAGCCCTGAGGACCTCTCTGTTTTGGGTATCTCCTCCACCGACTACCTGAAATTGAAAGAATTGGTATATGATGAAAATTGGGTAAATGATGAAAACGCATTTGAAGCAGATTTTGGAGCATTTGACTTCCCTATTCCTCATTTAAACCTGTCTTCTTCCATTGGAAATGGACTTACTTTTGCCTCAAAGTTCTTAACTTCAAAGCTAAGTGGGAAACAGGAGAAAACAAAAGCTCTAGTAGACTACTTGTTAACACTAAATCATCAGGGAGAAAGGTTGATGATAGATGACACCCTGAACTCTGCTGAAAAGCTTCAGCTGGCACTGATAATGGCTGACGTGTTCCTCTCAGCACTTCCCAAGGACACTCCATATCAGAATTTTGAGCTAAGGTTCAAAGAGTGGGGTTTCGAGAGAGGCTGGGGTGATACTGCAGAAAGAGTGAAGGAGACAATGCAAACTCTGTCAGAAGTACTTCAAGCACCAGATCCAGTGAATATGGAGAAGTTTTTTAGCAGAATTCCCACAATTTTCAATGTAGTGATCTTCTCTGTTCATGGTTATTTTGGGCAAGCAGATGTCCTTGGCTTGCCAGACACTGGTGGCCAGGTAGTTTACATATTGGATCAAGTAAGAGCTCTGGAAGCAGAGTTGCTCAACAGAATTAAGCAACAAGGGCTAAATGTGAAGCCTCAAATTCTTGTTGTCACAAGGCTCATACCTGATGCTCGAGGAACCAAGTGCAACCAAGAGTTGGAACCAATCATTGATACCAAATACTCCAACATTCTACGTGTGCCTTTTGTGACAGAGAAAGGAATCCTACGTCAATGGGTTTCTCGCTTCGACATTTATCCCTATCTTGAGAGGTTTACTCAGGATGCTACGTCCAAGATTCTAGACCTCATGGAAGGGAAACCAGATCTTATAATTGGAAATTACACCGATGGGAACTTGGTAGCATCTCTAATGGCTAGCAAACTTGGGATAACTCAGGGAACTATAGCACACGCTTTAGAGAAGACTAAGTATGAAGACTCAGATGTCATGTGGAAGGAGTTGGACCCCAAGTATCACTTTTCATGCCAATTCATGGCTGATACAATTGCAATGAACGCTGCTGATTTCATCATAACCAGCACATACCAGGAAATTGCGGGAAGCAAGGATAGACCTGGACAGTATGAAAGCCATGCTACATTTACGCTTCCAGGGCTCTGTAGGGTTGTTTCAGGAATAAACGTATTTGATCCCAAGTTCAACATAGCTGCGCCTGGAGCTGACCCGAATGTCTATTTCCCTTACACAGAGAAAGACAAAAGGCTAACTCAATTTCACCCTGCCATTGAAGAACTACTGTATGGTAAAGTGGATAACAATGAGCATATAGGATCTCTAGCTGAAAGGAGAAAACCCATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACTTATCTGGGTTAGTTGAGTGGTATGGAAAGAACAAGAGATTGAGAAACTTGGTGAACCTTGTTATAGTTGGAGGCTTCTTTGATCCTTCAAAATCCAAAGATAGGGAGGAAATGGAAGAAATAAGAAAGATGCATGCTTTGATTGAAAAATACCAACTAAAGGGTCAATTCAGATGGATTGCTGCACAGACAGACAGATACCGCAATGGTGAACTCTACCGATGCATTGCTGACACAAAGGGAGCTTTTGTGCAGCCTGCTTTGTATGAAGCATTTGGTCTTACTGTCATTGAAGCAATGAACTGTGGCTTGCCGGCCTTTGCTACTAACCAAGGAGGCCCGGCAGAAATCATTGTTGATGGGGTTTCTGGGTTCCACATTGATCCCCTCAATGGGGATGAATCAAGCAACAAAATTGCTAGTTTCTTTGAAAAATGCAAAGTGGATTCAACACACTGGAACAAGATTTCAGCTGCTGGATTGCAGCGCATAAATGAATGCTACACCTGGAAGATCTACGCAAATAAGTTGCTGAATATGGGAAGCATGTATACCTTCTGGAGGACCGTGAATAAGGAGCAGAAAGAGGCAAAACAAAGATACATCCAGATGTTTTATAATCTTTTATTTAAGAATTTGGTGAAGACGGTACCTGTTCCAAGTGATGAACCTCAAAAGCCAGTTTCCAAGCAGCAGACTCTAAAAAAGGAGGGCACAAGGCATGTCACTACTCATCCTCATGAGCTATGA 2514 0.4268 MASAPALKRTDSIADNMPDALRQSRYHMKRCFAKYLEKGRRIMKLHHLMEEMEQVIDDKSERNQILEGPLGFILSSTQEAVVNPPHVAFAVRQNPGVWEFAKVSPEDLSVLGISSTDYLKLKELVYDENWVNDENAFEADFGAFDFPIPHLNLSSSIGNGLTFASKFLTSKLSGKQEKTKALVDYLLTLNHQGERLMIDDTLNSAEKLQLALIMADVFLSALPKDTPYQNFELRFKEWGFERGWGDTAERVKETMQTLSEVLQAPDPVNMEKFFSRIPTIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLNRIKQQGLNVKPQILVVTRLIPDARGTKCNQELEPIIDTKYSNILRVPFVTEKGILRQWVSRFDIYPYLERFTQDATSKILDLMEGKPDLIIGNYTDGNLVASLMASKLGITQGTIAHALEKTKYEDSDVMWKELDPKYHFSCQFMADTIAMNAADFIITSTYQEIAGSKDRPGQYESHATFTLPGLCRVVSGINVFDPKFNIAAPGADPNVYFPYTEKDKRLTQFHPAIEELLYGKVDNNEHIGSLAERRKPIIFSMARLDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMEEIRKMHALIEKYQLKGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPAFATNQGGPAEIIVDGVSGFHIDPLNGDESSNKIASFFEKCKVDSTHWNKISAAGLQRINECYTWKIYANKLLNMGSMYTFWRTVNKEQKEAKQRYIQMFYNLLFKNLVKTVPVPSDEPQKPVSKQQTLKKEGTRHVTTHPHEL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1784 837 Gene3D - 11 149 - -
Glsi10g1784 837 FunFam Sucrose synthase 150 279 - -
Glsi10g1784 837 FunFam Sucrose synthase 12 149 - -
Glsi10g1784 837 Pfam Sucrose synthase 9 557 IPR000368 GO:0005985|GO:0016157
Glsi10g1784 837 MobiDBLite consensus disorder prediction 807 837 - -
Glsi10g1784 837 Gene3D Glycogen Phosphorylase B; 531 758 - -
Glsi10g1784 837 NCBIfam sucrose synthase 26 806 IPR012820 GO:0005985|GO:0016157
Glsi10g1784 837 FunFam Sucrose synthase 531 758 - -
Glsi10g1784 837 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 299 767 - -
Glsi10g1784 837 PANTHER - 7 810 IPR012820 GO:0005985|GO:0016157
Glsi10g1784 837 Pfam Glycosyl transferases group 1 568 733 IPR001296 GO:0016757
Glsi10g1784 837 MobiDBLite consensus disorder prediction 817 837 - -
Glsi10g1784 837 Gene3D - 150 279 - -
Glsi10g1784 837 Gene3D Glycogen Phosphorylase B; 284 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1784 Glsi-ChrGlsi10 12321513 12326543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1784 5 811 Glycosyltransferase AT4G02280 57.001 0.0 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1784 10 12321513 12326543 Glsi10g1784 10 12321513 12326543 ECH