Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1734 ATGACTCTCTCCATCTCCTTCCCTTACCCTTCCCTTTCTTCCACCACCATAGACTCCTTCGTCTTCGGAGGATGCACCCAACAAAAGTACTCATCCACCTCCCCCTACAGCTCCAACCTCGAGTCCCTCCTCACTTCCCTCGTCAACTCAGCCACCTACTCCGCCTACAACAACTTCACCGTCTTCGGCTCCACCCCACAAGACACCGTCTCCGGCCTCTACCAATGCCGCGGCGACCTCTCCATGCCCAACTGCGCCGCATGCGTCACCCGCGCCGTAACCCGCGTAGGCGACCTCTGCTCCCAGACCTGCGGTGCCGCGGTGCACCTGGAAGGCTGCTTCGTCAAGTACGATAACGCCACCTTCCTGGGTGTAGAGGACAAGACCGTCATTTTAAAGAAATGTGGACCCTCCCTTGGCTACAATTTGGAGGCTACGAGCGACAGAGATGCGGTTTTGTCTGGGTTGTCGGGTTCGGGGGGTACGTTCCGGGTAGGTGGATCCGGAAACGTGCAGGGCATGGCCCAGTGCACCGGGGATCTAAGCTTTGTTGAGTGCCAGGATTGTCTCTCGGAGGCGATCAACCGGCTGAGAAGCGATTGTGGCACTGCGGATTACGGGGATGTTTTCTTGGGCAAGTGTTACGCCAGGTATTCTACCGGTGGGGCCCATGGTTACTCCAAGGCCCATGATAAATCAAGAAATCCAGGTGAAAAGACATTTGCCGTTATAATTGGGTTATTAACAGGAGTAGCTATACTTATTATTTTTCTTGCTTTCTTGAAGAAGATTTGCCAAGGGAATGGTAAATAG 813 0.5424 MTLSISFPYPSLSSTTIDSFVFGGCTQQKYSSTSPYSSNLESLLTSLVNSATYSAYNNFTVFGSTPQDTVSGLYQCRGDLSMPNCAACVTRAVTRVGDLCSQTCGAAVHLEGCFVKYDNATFLGVEDKTVILKKCGPSLGYNLEATSDRDAVLSGLSGSGGTFRVGGSGNVQGMAQCTGDLSFVECQDCLSEAINRLRSDCGTADYGDVFLGKCYARYSTGGAHGYSKAHDKSRNPGEKTFAVIIGLLTGVAILIIFLAFLKKICQGNGK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1734 270 ProSiteProfiles Gnk2-homologous domain profile. 18 122 IPR002902 -
Glsi10g1734 270 FunFam Cysteine-rich repeat secretory protein 60 143 221 - -
Glsi10g1734 270 Pfam Salt stress response/antifungal 25 119 IPR002902 -
Glsi10g1734 270 Pfam Salt stress response/antifungal 163 220 IPR002902 -
Glsi10g1734 270 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 13 265 - -
Glsi10g1734 270 Gene3D - 17 122 IPR038408 -
Glsi10g1734 270 Gene3D - 139 221 IPR038408 -
Glsi10g1734 270 ProSiteProfiles Gnk2-homologous domain profile. 123 223 IPR002902 -
Glsi10g1734 270 FunFam cysteine-rich repeat secretory protein 3 17 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1734 Glsi-ChrGlsi10 11910005 11911146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1734 30 197 Receptor kinase-like Gene Family AT4G23160 32.065 1.49e-15 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1734 10 11910005 11911146 Glsi10g1734 10 11910005 11911146 CCT
Glsi10g1734 10 11910005 11911146 Glsi10g1734 10 11910005 11911146 ECH