Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1642 ATGGAGCAAGAAATGGAGAAGGTAAAGAGAGGTAGAGGAGAAGAAACTGAAGAAGCGAAATGGGTGCATGATGCTTCTGTGGATTGTAGAGGCAGAGTTCCTCTGCGTGCTTCTACTGGCGTATGGAAAGCTTCCCTCTTTGTTCTCACTATTGAATTTAGTGAAAGAGTAAGCTTCTTTGGAATAGCAACAAATCTCATCACCTACCTGACCATAGTGATTCATCAAGACCTCAAAACAGCAGCAAAGAATGTAAACTACTGGACAGGAACAACCACTCTGATGCCTCTAATAGGAGGATTTCTAGCTGATGCCTTCACTGGCCGATTCCATATGATCCTCTTTTCTTCCCTCATATACCTTATGGGGTTGAGCCTCTTGACTATGTCTCAGTTCATTCCAAGTCTAAAGCCATGCAACACTAAGGTATGTCATCGTCCTAGGAAGGTTCACAAAGTGGTTTTTTTCCTTGCCCTGTACTGTATCTCCTTGGGCACTGGAGGATACAAGCCCTGCTTAGAAAGCTTTGGAGCTGATCAGTTTGATGATGATCACTCCGAAGAAAGGAAGAAGAAGATGTCTTACTTCAACTGGTGGAACTTCGCACTGTGCTTTGCATTACTGCTTGGTGCAACAGTCATTGTTTATGTTCAAGACTATGTCAGCTGGGGAGCTGCAAGTCTCATCGTCACTATTTTTATGGCTCTCACTGTCATAGCTTTCTATGCCGGGAAGCGTTTTTACAGGTTCAGACTCCCAGAAGGAAACCCCTTGACACCAATTTTGCAGGTCGTAATTGCAGCTATAAGGAAAAGGAACCTAGCCTGTCCTTCAAATCCTTCTCAGTTGTATGAAGTCCCCATGTCCCAGGGAAGGCTTCTAAGCCATACTAGCAGGCTCAGGTTTCTCGACAAGGCTGCAATAATAGAAGAGAAGAATGTTGAGCAGAAAGACAATCCATGGAGATTAACAACGGTGACAAGGGTGGAGGAGACAAAGCTTATTCTGAATGTGATTCCTATATGGCTAACTTCATTAGCAAATGGAGTAAGCATAGCACAGGGCTCAACGCTCTTCGTCAAGCAAGCAGCTGCTATGAACTTAAAGCTAAGTGGTAGTTTTAAAATCCCACCAGCCTCCATTGCCGCTGCTTCGGCTGTTGGTACCCTAGTATCTATCCCCATATACGACAAAATCATTGTCCCATTTCTGAGGAAAGTCACTAAAACCGAAAGAGGCCTCAGCATTCTACAGAGGATCGGTATTGGCTTGACATTCTCAGCAATAGTTATGGTAGTAGCAGCCTTAGTGGAAACAAAGAGACTAAGAATGGCTGAACACGAAACAGGGGAGATAAGTGTTTTTTGGTTGGTACCTCAGTATTTGCTACTTGGGTTTGGTGATTCGTTTTCTTTGGTTGGTTTGCAAGAGTATTTCTATGACCAAGTTCCGGACTCAATGAGAAGCATAGGAATGGCTTTATTTCTTAGTGTGATTGGGGTGGCAAGCTTCTTAAGTAGCTTTATAATTATAATTGTGGATCATGTGACAGAGAAGAGTGGCAAAAGTTGGTTTGGGAAGGACATAAATTCAAGTCGTTTGGACAAGTTTTACTGGTTGTTGGCAGCCTTAAATGCCTTAAATGTGTGTGCCTTTATCTTGTTGGCAAGAAGGTACACTTACAAGACCGTTCAGAGGAGGGCCATGGAAGCTGATAATGGCAAGAGTAGTGAGGTGGAGGTGGTCCCATAA 1752 0.4361 MEQEMEKVKRGRGEETEEAKWVHDASVDCRGRVPLRASTGVWKASLFVLTIEFSERVSFFGIATNLITYLTIVIHQDLKTAAKNVNYWTGTTTLMPLIGGFLADAFTGRFHMILFSSLIYLMGLSLLTMSQFIPSLKPCNTKVCHRPRKVHKVVFFLALYCISLGTGGYKPCLESFGADQFDDDHSEERKKKMSYFNWWNFALCFALLLGATVIVYVQDYVSWGAASLIVTIFMALTVIAFYAGKRFYRFRLPEGNPLTPILQVVIAAIRKRNLACPSNPSQLYEVPMSQGRLLSHTSRLRFLDKAAIIEEKNVEQKDNPWRLTTVTRVEETKLILNVIPIWLTSLANGVSIAQGSTLFVKQAAAMNLKLSGSFKIPPASIAAASAVGTLVSIPIYDKIIVPFLRKVTKTERGLSILQRIGIGLTFSAIVMVVAALVETKRLRMAEHETGEISVFWLVPQYLLLGFGDSFSLVGLQEYFYDQVPDSMRSIGMALFLSVIGVASFLSSFIIIIVDHVTEKSGKSWFGKDINSSRLDKFYWLLAALNALNVCAFILLARRYTYKTVQRRAMEADNGKSSEVEVVP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1642 583 Pfam POT family 111 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
Glsi10g1642 583 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 40 561 - -
Glsi10g1642 583 Gene3D MFS general substrate transporter like domains 13 568 IPR036259 -
Glsi10g1642 583 SUPERFAMILY MFS general substrate transporter 41 563 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1642 Glsi-ChrGlsi10 11068076 11070386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1642 17 578 Organic Solute Cotransporters AT3G53960 57.739 0.0 709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1642 10 11068076 11070386 Glsi10g1642 10 11068076 11070386 ECH