Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1626 ATGCGAAATGGAATCCAAAATGATCACCCGATCCCAGAAGGGAAGCAGAAATCATTTGCCTCTCCGCCACCGTACTCTGCAACACGCGTCAACAGAGGGATCGAGGAAGATTCAACATTTTCTTATAGCTTAGTTAATGGATATATAGAAAGGGGAGGTTGCAGAGTTCCGATACTCACGCTGGCTTTCAGTTACATATTAGTGGAGGAGGAAGAGCCCGTCAGCGACACGCTTATGTCGCAGCAAGAAGAACCACCACCCATGGCCAGGGCTGAGTTTCAGGTTAATACCCAAAAGCTGCACGATGATGAAGCTGACTTCGAAGTTGAAATCCCAGACACCGCTCACCAGATTAGCAGTGATTCATGGTTTCAAGTGGGTTTTGTTCTCACCACCGGAATCAACAGCGCGTATGTACTTGGATACTCCGGGACCATCATGGTTCCTCTGGGTTGGATATATGGTGTACTTGGTTTGATTGCTGCTACTGCAATATCACTGTATGCAAATTCTCTTCTTGCCAAGCTCCATGAATTTGGAGGAAAGAGGCATATTAGATACAGAGATCTTGCTGGACATATATATGGTAGGAAAGCATATTCTCTCACATGGGCGCTGCAGTATGTCAATCTTTTCATGATAAATACTGGATATATCATTTTGGCTGGTTCAGCACTGAAGGCTGTTTATGTTCTATTTAGGGATGATAATCAGATGAAGCTTCCATATTTTATTGCCATAGCTGGATTTGTGTGTGCAATGTTTGCCGTCTGCATTCCTCATCTGTCAGCTCTTAGAGTTTGGCTGGGATTTTCAACTGTCTTCAGCATCATATATATTGTTACAGCATTTGCACTCTCGCTTAAAGATGGTATGAAATCACCAGCTCGAGATTATACTATTCCTGGGACGTCAACAAGTAAAATATTTACAACAATTGGGGCGTCTGCTAATCTTGTGTTTGCATATAATACAGGAATGCTTCCCGAGATACAGGCAACGATTAGGCAGCCGGTTGTGAAGAACATGATGAAAGCACTGTATTTTCAGTTTACCATTGGAGTTGTACCGATGTATTTGGTTACTTTTACAGGGTACTGGGCTTATGGATCCTCCACCAAAACCTATTTGCTGAGTAATGTGAATGGTCCAGTCTGGGTGAAAGCCACGGCCAATATTGCTGCCTTTTTTCAATCAGTTATCGCATTGCATATATTTGCAAGTCCAATGTACGAGTATTTGGACACTAAATATGGGGTCAAAGGAAGCGCACTGGCTTTTAAGAATTTGTCATTTCGAGTTTTGGTAAGAGGAGGCTACCTGGCCTTCAATACATTTGTATCAGCTCTCTTGCCATTCCTTGGAGATTTTATGAGCCTCACAGGAGCTATCAGCACATTTCCCCTCACATTTATCCTGGCAAACCACATGTACCTAGTGGCAAAGAAGAACAAACTAACGTCCGTACAAAAACTCTGGCACTGGCTCAACGTTTGTTTCTTTGGCCTCATGTCTGTTGCAGCAGCAATTGCAGCCCTACGGCTTATTTCTGTAGATTCCAAAACGTACCATGTTTTTGCTGATTTATGA 1590 0.4308 MRNGIQNDHPIPEGKQKSFASPPPYSATRVNRGIEEDSTFSYSLVNGYIERGGCRVPILTLAFSYILVEEEEPVSDTLMSQQEEPPPMARAEFQVNTQKLHDDEADFEVEIPDTAHQISSDSWFQVGFVLTTGINSAYVLGYSGTIMVPLGWIYGVLGLIAATAISLYANSLLAKLHEFGGKRHIRYRDLAGHIYGRKAYSLTWALQYVNLFMINTGYIILAGSALKAVYVLFRDDNQMKLPYFIAIAGFVCAMFAVCIPHLSALRVWLGFSTVFSIIYIVTAFALSLKDGMKSPARDYTIPGTSTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTIGVVPMYLVTFTGYWAYGSSTKTYLLSNVNGPVWVKATANIAAFFQSVIALHIFASPMYEYLDTKYGVKGSALAFKNLSFRVLVRGGYLAFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKNKLTSVQKLWHWLNVCFFGLMSVAAAIAALRLISVDSKTYHVFADL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1626 529 PANTHER OS05G0424000 PROTEIN-RELATED 118 511 - -
Glsi10g1626 529 MobiDBLite consensus disorder prediction 1 32 - -
Glsi10g1626 529 Pfam Transmembrane amino acid transporter protein 121 513 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1626 Glsi-ChrGlsi10 10910470 10913981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1626 147 529 Organic Solute Cotransporters AT3G55740 78.329 0.0 626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1626 10 10910470 10913981 Glsi10g1626 10 10910470 10913981 CCT
Glsi10g1626 10 10910470 10913981 Glsi10g1626 10 10910470 10913981 ECH