Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1623 ATGATTAATGAATATTATGATGATTCTCACTGTGGTGGAGGGGTGAGAGTGAAAGAGCGGGGTGAGCTATCTGCTGCATGTTCGCTTTCTGTGGCAAGATCTGAAGTGAGCATCCCAACACTTCTCGCGAGTTGGAGGGCCAAAAGACTTCAATGGCCATCCACGACAGGTGTTGTCAAGGCATCGGAAGGAGGGGCGATTTCTCTTGCTACCGACTGGCCAATTCCAAAGGACTCCGATCAAGACCCACCTCACAAAATGAAGGGCCAAAGTCGTTTCTTCACAATCGGGCTTATCGCTTCCTGGTACTCCTCCAACATTGGGGTCCTTTTGCTCAACAAGTACTTGCTCAGCAACTATGGCTTTAAGTACCCGATCTTCCTCACCATGTGCCACATGACCGCTTGCTCCTTGCTCAGCTACGTTGCTATAGCATGGATGAAGATGGTGCCTATGCAGACCATTCGATCTCGGGTTCAATTCTTGAAGATCTCGGCTCTCAGCCTTGTCTTCTGCGTCTCCGTCGTCTTTGGCAACATATCGCTTAGGTATTTGCCCGTCTCCTTTAACCAGGCAATTGGAGCTACAACGCCATTCTTCACTGCGGTTTTTGCTTACCTCATGACCTTGAAGAGGGAGGCTTGGCTCACTTATGTGACCCTTATTCCTGTTGTTACTGGGGTCATCATTGCTAGCGGGGGTGAACCAAGTTTCCATTTATTTGGGTTCATAATTTGTGTTGCAGCTACAGCTGCTAGGGCCCTAAAGTCAGTGTTACAAGGAATTTTACTTTCTTCTGAAGGGGAGAAGCTGAATTCCATGAATCTTCTCCTTTACATGGCTCCGATGGCTGTTGTTTTCCTTCTTCCTGCCACACTTATAATGGAAGAAAACGTTGTTGGCATCACGTTAGCTCTTGCCAGAGATGATGTCAAGATCATCTGGTATCTGCTATTTAATTCAGCACTTGCTTATTTTGTCAATCTGACCAACTTTTTGGTCACAAACCATACAAGTGCTCTTACACTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCGGTTGTGGTTTCAATTCTAATATTTAGAAACCCGGTCTCAGTCACAGGAATGCTGGGTTACTCCCTCACAGTCTTTGGAGTTGTACTTTACAGTGAAGCCAAAAAGCGAAGCAAATGA 1179 0.464 MINEYYDDSHCGGGVRVKERGELSAACSLSVARSEVSIPTLLASWRAKRLQWPSTTGVVKASEGGAISLATDWPIPKDSDQDPPHKMKGQSRFFTIGLIASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPMQTIRSRVQFLKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTNHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVFGVVLYSEAKKRSK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1623 392 Pfam Triose-phosphate Transporter family 98 385 IPR004853 -
Glsi10g1623 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 283 386 - -
Glsi10g1623 392 PANTHER SOLUTE CARRIER FAMILY 35 95 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1623 Glsi-ChrGlsi10 10896235 10905020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1623 86 392 Organic Solute Cotransporters AT3G11320 91.857 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1623 10 10896235 10905020 Glsi10g1623 10 10896235 10905020 CCT
Glsi10g1623 10 10896235 10905020 Glsi10g1623 10 10896235 10905020 ECH