Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1617 ATGGCTATGGAGGATCGAAACGTGAGCAAAATGAGTTCCCGCTTGACCGATGTGGTACTTGACTGTGTTATGCCTTATATTGACGACCCCAGAGACCGGGATGCAATTTCTCAGGTATGCCGGCGGTGGTACGAGCTTGATTCCTCGACCCGAAAGCATGTGACGATTGCTCTCTGCTACACGACGACCCCGAACCGTCTCCGCCGAAGATTTCCGCACCTAGAGTCACTGAAGCTGAAAGGGAAACCGAGGGCGGCGATGTTCAATTTGATTCCGGAGGATTGGGGAGGGTTTGTGGCTCCTTGGGTTAGAGAGATTGCAGTGTATTTCGATTGCTTAAAGTCGCTCCATTTTCGGCGCATGATTGTGAGGGATTCCGATCTTGAGCTTCTTGCACGGTCGCGGGGACACGTCCTTCATGCTCTTAAACTCGATAAGTGTTCTGGTTTTTCCACGGATGGCCTTTACCATATTTGCCGGTCTTGCAGGAATATAAGAGTCTTATTTTTGGAGGAGAACCAAATTATTGAGAATGATGGGGAATGGCTACATGAACTTGCTTTGAATAATACAGTTCTTGAGGCTCTAAATTTTTACACAACAGATCTTACCAATATCAGAATTGAGGACCTAGAACTTATAGCCAAAAATTGCCGTAACTTAGTTTCTGTGAAAATTACTGATATTGAAATCATGGATCTTGTAAATTTCTTTCGTTCTGCATCTGCACTAGAAGAATTCTGTGGAGGTTCCTACAATGAGCAACCGGAAAAGTACGCTAATGTATCATTTCCTGCAAAGTTATGTCGATTGGGTTTAACGTATATTGGAAAGAATGAACTGCCAATAGTGTTCCCTTTCGCAGCCCTCCTCAAAAAATTGGATCTCCTGTATGCAATGTTGGATACAGAGGACCATTGTATCTTAATCCAGAAGTGCCCTAACTTGGAAGTCCTCGAGTCAAGGAATGTAATTGGAGATAGAGGATTAGAAGTTCTTGCTCGAAGTTGCAAGAGGCTTAAGAGGCTTAGGATTGAGCGAGGTGATGATGAACATGGAATGGAGGACGAAGAAGGTGTTGTTTCTCAGAGAGGATTAATTGCTTTGTCACAGGGCTGTTCAGAACTTGAATATCTGGCTGTTTATGTATCCGACATCACAAATGCATCTCTGGAACATATTGGCACTCACTTGAAAAACCTTACTGATTTTCGCCTTGTCTTGCTAGACCGTGAGGTGACAATAACTGATTTGCCCCTTGACAATGGAGTGAGGGCTTTACTGAGGGGCTGTGATAAGCTTAGGAGATTTGCTCTGTATCTCCGTTCTGGGGGCTTGACTGACGTTGGCCTTGCCTACATAGGGCAATACAGCCAAAATGTGAGATGGATGCTTTTAGGCTATGTAGGGGAGTCTGATGATGGACTTTTGACGTTTTCTAAGGGCTGTCCTAGCCTTCAGAAACTTGAAATGAGAGGCTGTTCCTTCAGTGAGTATGCACTGGCTGTTGCTGCAACACAACTGACCTCTCTGAGGTATTTATGGGTGCAAGGGTATAGAGCATCTGAATCTGGGCGTGATCTTTTGGCAATGGCTCGACCCTTCTGGAATATCGAGTTGATTCCTTCTAGACGAGTTCTTGTTGGTTTTCAACAGGGAGAGTCTGTAACGGTTGAGCATCCTGCCCATATTCTTGCATATTACTCTCTTGCAGGACAAAGATCAGATTTTCCAGATACTGTTATTCCTTTGGATCCAGTAGCATATGTTGACGTGTAG 1779 0.4463 MAMEDRNVSKMSSRLTDVVLDCVMPYIDDPRDRDAISQVCRRWYELDSSTRKHVTIALCYTTTPNRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGFVAPWVREIAVYFDCLKSLHFRRMIVRDSDLELLARSRGHVLHALKLDKCSGFSTDGLYHICRSCRNIRVLFLEENQIIENDGEWLHELALNNTVLEALNFYTTDLTNIRIEDLELIAKNCRNLVSVKITDIEIMDLVNFFRSASALEEFCGGSYNEQPEKYANVSFPAKLCRLGLTYIGKNELPIVFPFAALLKKLDLLYAMLDTEDHCILIQKCPNLEVLESRNVIGDRGLEVLARSCKRLKRLRIERGDDEHGMEDEEGVVSQRGLIALSQGCSELEYLAVYVSDITNASLEHIGTHLKNLTDFRLVLLDREVTITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDVGLAYIGQYSQNVRWMLLGYVGESDDGLLTFSKGCPSLQKLEMRGCSFSEYALAVAATQLTSLRYLWVQGYRASESGRDLLAMARPFWNIELIPSRRVLVGFQQGESVTVEHPAHILAYYSLAGQRSDFPDTVIPLDPVAYVDV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1617 592 CDD F-box_AtTIR1-like 13 51 - -
Glsi10g1617 592 FunFam Coronatine-insensitive protein 1 52 587 - -
Glsi10g1617 592 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
Glsi10g1617 592 Gene3D - 3 51 - -
Glsi10g1617 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 15 530 - -
Glsi10g1617 592 Pfam F-box 13 53 IPR041567 -
Glsi10g1617 592 Gene3D Ribonuclease Inhibitor 52 587 IPR032675 -
Glsi10g1617 592 SUPERFAMILY RNI-like 67 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1617 Glsi-ChrGlsi10 10867934 10871668 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1617 10 10867934 10871668 Glsi10g1617 10 10867934 10871668 CCT
Glsi10g1617 10 10867934 10871668 Glsi10g1617 10 10867934 10871668 ECH