Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1601 ATGGATCCTCACCCTCTTGGTTATGGTCATGGCAACGGCACACAAACCATAGAGAATTGTCATTTTGATATGATTAAAAACGTAATGGTGCTTGCCTTTGCTATTTTTGTGAGCCTCGAGGAGTCGCACTTAATCCAGATTGTTAAGCATTTGAAGAGACTTACAATTAATGGTGCTGCAATGCTTAGAATTGATAGGCTCAGATGTGAAGATAATGATGAATTCTGTAAAAGAGCAGAATTGCAAGTCCTCTTCTTCCTCGAGACAATTGATAACATGATGGTATATTGTGTTTCCAGATCAATGTTGCCTCAGAAACAAGCCGAAGAAGTGATGATGTCAAGCCTGAATCAGACGATTGAGCGTGAAGACAGAGAGGAAGAGAAGACAGATAGCTCTTCTTTTAGCCTTAAAAGTTTTCTATGGCATGGCGGGTCTGTCTATGATGCCTGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAAGTTCTGTTAACGCTGCCATATTCTTTCTCTCAGCTGGGAATTCTTTCAGGCATCATATTGCAAGTCTTCTATGGCCTGCTTGGTAGCTGGACTGCTTATTTAATTAGCATTCTGTACATCGAGTATAGAAGCCGAAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTCGAAGTGTTGGATGGTTTACTGGGTCCATATTGGAAAGCTGTTGGATTGGCCTTCAACTGTACTTTTCTCCTCCTAGGCACTGTTATCCAGCTTATAGCTTGTGCAAGTAATATATACTACATAAATGACAAATTGGACAAGAGGACTTGGACTTACATTTTTGGAGCTTGCTGTGCCACCACAGTTTTCATACCCTCATACCACAACTACAGGATTTGGTCCTTCCTTGGCCTTGGCATGACCACTTACACTGCTTGGTATTTGACCATTGCAGCCCTTGTTCATGGCCAGGTTGAAAATGTGAAGCACTCGGGCCCAACCAAGATGGTTTTGTATTTCACAGGCGCCACCAACATACTGTACACTTTCGGCGGCCACGCCATCACAGTGGAAATCATGCATGCAATGTGGAGGCCTCAGAAGTTCAAATACATCTATCTTTTGGCCACTCTCTATGTGTTCACCCTCACCCTGCCATCTGCATCTGCCGTCTACTGGGCCTTCGGTGATCAACTCCTCGACCACTCCAATGCCTTCTCACTCCTTCCTCGCACCGGCTGGCGCGACGTGGGTGTCATTCTAATGCTCATTCACCAGTTCATAACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACGAAGAGCATATGTTTGAGGGCTCTTGCTCGGCTGCCGGTGGTCATACCTGTATGGTTCTTGGCAATTATTTTCCCCTTCTTTGGCCCCATTAACTCGGCTGTGGGGGCTCTTTTGGTCAGCTTCACCGTCTACATCATCCCTTCTTTGGCCCATATGCTCACTTTCAGGTCTGCCTCCGCACGACAGAATGCAGCAGAAAAACTTCCCTTCTTCATCCCAAACTGGACGGTGATGTTTGTGGTGAATACATTTGTAGTGGTGTGGGTTCTGGTGGTAGGGTTTGGATTTGGAGGGTGGGCTAGCGTGACAAATTTCATCAAGCAGGTCGACACATTTGGACTATTTGCCAAGTGCTACCAGTGCCCGCCCAGAGTGCCGCCCTCCTCCAATCATACAGCGCATCACTGA 1743 0.459 MDPHPLGYGHGNGTQTIENCHFDMIKNVMVLAFAIFVSLEESHLIQIVKHLKRLTINGAAMLRIDRLRCEDNDEFCKRAELQVLFFLETIDNMMVYCVSRSMLPQKQAEEVMMSSLNQTIEREDREEEKTDSSSFSLKSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGILSGIILQVFYGLLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLLGTVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSYHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVKHSGPTKMVLYFTGATNILYTFGGHAITVEIMHAMWRPQKFKYIYLLATLYVFTLTLPSASAVYWAFGDQLLDHSNAFSLLPRTGWRDVGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPVWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTFRSASARQNAAEKLPFFIPNWTVMFVVNTFVVVWVLVVGFGFGGWASVTNFIKQVDTFGLFAKCYQCPPRVPPSSNHTAHH 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1601 580 PANTHER OS05G0424000 PROTEIN-RELATED 149 531 - -
Glsi10g1601 580 Pfam Transmembrane amino acid transporter protein 143 536 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1601 Glsi-ChrGlsi10 10747703 10756053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1601 105 566 Organic Solute Cotransporters AT2G21050 76.840 0.0 751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1601 10 10747703 10756053 Glsi10g1601 10 10747703 10756053 CCT
Glsi10g1601 10 10747703 10756053 Glsi10g1601 10 10747703 10756053 ECH