Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1580 ATGAGGCTGGGATTAGACACTTACGAGACGAACTCGGAGCCAAGTCGCTCTTTAACGCCAAAAGAGGAAGTTGAATGGATTCCACTTCAGAAACACCCAGTCTTCGCCGCCACCAAAGCCTCGATAGACGGCGATTCCGGCGTTGCAGTGTCCAGAAATCTGGTGACCTGGGATGGAGCTTCTCGGCTTTATTTCTGGGACCCCAAGATCAACTGCCTCCATCGTCTGTCTCTTCGGCTGGGCGAGCCTGATCCTACTTCTGTACTGGCTGCTTCCCCTTCTAAGGTATTGCAAGCAGATGTGGAGCTCAACTTTGCTGTCCACAAAATCTCTATCAACAGGAACGGATCAGCATTACTCCTTTTTGGTTCTGAAAGACTATGTGTTATGTATCTGTATGGACGTACATCAAAAAAGGACGTAAATTTGATTTGCAGGACTATTATGATTGGTTCACAATCATATTCTAATGTTAGCAATAATATACGTGTATTACAAGCTCTATGGCATCCTTACAGTGATAGTCATCTGGGAATCCTTTCCTCTGATTCAGTGTTCCGGCTTTTTAATTTGGCTTTGGATCCTTTGCAACCAGAGCAAGAATATTATTTGCAGCCTGTGAATCTAGGCAGATCCAGGAATGCCTCATCTATGTGCCCAGTTGATTTTTCTTTTGGGGGTGACCACTTATGGGACAGGTTTAGTGTTTTTATTTTGTATACTGATGGAGCTATTTACATCCTTTGCCCAGTTGTTCCATTTGGAAGTCTCTTCAAATCAGAATCTGTATTAGAAATTTACAATGATGCTCATGCATTTGGACTCGAATCAGTGAACCCTAAAGCTGCTAGTAATTCAAAATTGGCAATCTCATGGTTGGAAGCAACATTCCCAGAGTTACAAAACGAAGAAATGGGGGGAGAAAACCTGTCTCTGCTAAGAGCTCATGCTTATGCTCAATTCGATGCATCTCTTGTACTGCAGGGACCCCTGCAAAGAGTAGGTCAAGGTGGGAATGAAGATTTGGTTGGTCGTAGTGCAGAATGTGAAGGTCGTGCAGTTAGTTTTCTTTATGATTTAGTCAGCAAAGACACAATATTGGTAACTGCCTGGAGTGGTGGGCAGATACAGATAGATGCTCTGGCTGATGAGATCCAACCTGTCTGGAGTGTTGGTAGTCCTCCTCGTCTTCGTGTTGATTCCCATGACCATATTCTTGGCATTGCTATGATTTGTGAGTTAATTACCTGTGGGCTTCCAGAGAAGCTTGATCAAACTGTCTGGTTGGGCAATCCGACACCTCTGCTAAGACTTGCTATTGTGGATTTAGCTCTGCCGAGAAGGGTTGAAAGTGGTCATAATATTGCACTGTTCATTGATCCTCTTATGCCTGAAAGAATATATTCCCTTCATGATGGAGGGATCGATTCAATAGTGTTGCATTTTCTTCCATTCACAAGTCAGGCAAATGGCAAGGATGATTCGATGAGAACTCCTTCTGTGCACCCTGTTCTAAATACATGCCAGAGTGGGATCTCCTCAGCATCCCCGCTTTGTGGTTTTGTGTCATTGTCAGATTCCTTTGGATATTCATGGATTGTGGCAATCACTTTTTCACAAGAGTGTATTGTGCTTGAGACAAAAACATGGAACCTCTTGCTGCCTGCAAGTGTTGATATGGAGAAAAAACCCATTCAATGGGAGGAGGAATCAAAAGAGAGAGACATACCAACTATCATTAGTAAAGAATTACTTAGTGGGCCAAAGGTGGTTCTTGTTCCTCAGGCATCTCCAGGTTTACGTTTGGTTTCACCTGATTCAATTGAAGGCCGATCAACGTTACATCAGTATTTCAAGCTTTTTCATGAAACTTATGTGGAATATGCACATAAGGTTTACTTGGAACTCAAGCATCATGCTCCTCAGTTGAAGAAAATCATTGATGACCAACATGCACGTTTGGGTGCTGCAGAGCAAAAGCTTTTGAAAGTTGAGGAGAAACGGTCAGGATTAGAGAAAAGGATAGATCGAGCAGTTCAGATGCACAGTTCTTTGGAAGAGCGTTTGCAACGACTAAGGAACTTACCTGGTGCTCACAAAAAACCATTATCTAGAGCCGAGCGACAGTTCAAGTCTGAGCTTGACCACGTCAGGGAAGTTGAGTTGGATTCTTTGCATTCTTCTGTTGATGCTCTAAGTGCAAGGCTGACGAGGTACAAGCAAGCATCCAAAGTCAATAACCCCCAAAAGCAAATACCAGGGAAGAATAATTATGCTGAAAATGCTCAGATATTGAAGCTCAAATCATCCCTTGAAAAACTTTCACTTGTAAATAGCGAGAATTCTAGTAAAGTTAAGTTTGTCGAGTCTGCATTGAGAACCCAGGAAAGAAGCAGCAGGGAATCAAGCCTGCCAAGGCTTTGA 2424 0.4307 MRLGLDTYETNSEPSRSLTPKEEVEWIPLQKHPVFAATKASIDGDSGVAVSRNLVTWDGASRLYFWDPKINCLHRLSLRLGEPDPTSVLAASPSKVLQADVELNFAVHKISINRNGSALLLFGSERLCVMYLYGRTSKKDVNLICRTIMIGSQSYSNVSNNIRVLQALWHPYSDSHLGILSSDSVFRLFNLALDPLQPEQEYYLQPVNLGRSRNASSMCPVDFSFGGDHLWDRFSVFILYTDGAIYILCPVVPFGSLFKSESVLEIYNDAHAFGLESVNPKAASNSKLAISWLEATFPELQNEEMGGENLSLLRAHAYAQFDASLVLQGPLQRVGQGGNEDLVGRSAECEGRAVSFLYDLVSKDTILVTAWSGGQIQIDALADEIQPVWSVGSPPRLRVDSHDHILGIAMICELITCGLPEKLDQTVWLGNPTPLLRLAIVDLALPRRVESGHNIALFIDPLMPERIYSLHDGGIDSIVLHFLPFTSQANGKDDSMRTPSVHPVLNTCQSGISSASPLCGFVSLSDSFGYSWIVAITFSQECIVLETKTWNLLLPASVDMEKKPIQWEEESKERDIPTIISKELLSGPKVVLVPQASPGLRLVSPDSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIIDDQHARLGAAEQKLLKVEEKRSGLEKRIDRAVQMHSSLEERLQRLRNLPGAHKKPLSRAERQFKSELDHVREVELDSLHSSVDALSARLTRYKQASKVNNPQKQIPGKNNYAENAQILKLKSSLEKLSLVNSENSSKVKFVESALRTQERSSRESSLPRL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1580 807 PANTHER NUCLEOPORIN NUP84-RELATED 19 797 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Glsi10g1580 807 Pfam Nuclear pore component 29 215 IPR019321 -
Glsi10g1580 807 Pfam Nuclear pore component 454 775 IPR019321 -
Glsi10g1580 807 Coils Coil 647 695 - -
Glsi10g1580 807 MobiDBLite consensus disorder prediction 787 807 - -
Glsi10g1580 807 MobiDBLite consensus disorder prediction 790 807 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1580 10 10565076 10574319 Glsi10g1580 10 10565076 10574319 ECH