Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1578 ATGATTTCTTCAAAGGAAGAGAGATCCAAAAGGATACTAAGGGGTGCGAAGACTGTGTTCTTCTTGATCACCATGGTCATATCGCTGCTGCTTTTCTCGGCTCCGCTTCTTCTGGTTATAGCCGATGCACTTGTTCCTTCTGCTCTACTCTCTGCGCTTTCCCCTTCTTCTCTCACCCCGCAAACTCTTTCTTCCCACTTCCATAACTACGATTTTCGCTACTCTCTCATTGATATTCCCCTCGTTTCCATTATAAGATCCGTCGTCATCTTATGTGTTTATAGTTTATGTGATGGGCCAAGGCTTTCGCGGGGACCGTATTTGGGGATCACGACGATCTGCTCTGTATTGTCTCTGGTATTTGTTTCGCTGAAAGCTGTGTACGTTTTCAGCCTTCCGGGAGGAGGGTATGTCAGGGCCTTCGAAATAGCTCTGTTCGCGTGCTCCTGCGCTTTGGCTGTTGGGCATATCGTGGTGGCTTATAGAACAAGTTGCAGAGAAAGACGAAAGCTTCTGGTTTACAAAATTGACATGGAAGCTATTTCAGCCAGGTATCCAAAGATTCGTAAAGAAGAGAGAGTCAAATGA 588 0.4609 MISSKEERSKRILRGAKTVFFLITMVISLLLFSAPLLLVIADALVPSALLSALSPSSLTPQTLSSHFHNYDFRYSLIDIPLVSIIRSVVILCVYSLCDGPRLSRGPYLGITTICSVLSLVFVSLKAVYVFSLPGGGYVRAFEIALFACSCALAVGHIVVAYRTSCRERRKLLVYKIDMEAISARYPKIRKEERVK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1578 195 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 4 187 - -
Glsi10g1578 195 Pfam Cholesterol-capturing domain 61 129 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1578 Glsi-ChrGlsi10 10561452 10563561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1578 7 181 Miscellaneous Gene Families AT1G80280 45.263 4.52e-35 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1578 10 10561452 10563561 Glsi10g1578 10 10561452 10563561 CCT
Glsi10g1578 10 10561452 10563561 Glsi10g1578 10 10561452 10563561 ECH