Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1546 ATGGCCGGCGAGGACCTCTTCTCTTCCTTAATCTCAGACATCGACACCTACACTGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGGATCCGAAAGATGAAGGATACTCTGTCTCCTTCCACCCTCAAAGAGAAGCTACCGGGGTTCTTGCAGAAATGCGCGCAGACTTTCGAGTCTGATCGACGCTACAGAAACGACATGCGCTATCTTCGGGTTTGGCTGCATTTGATGGATTTTGTGGATGACCCAATATCGCTTTTGAGAACCATGGAGGTTAATCATATTGGGACAAAACGTTGCCAATTCTACCAGGCATATGCTCTTTACTATGAGAAGACCAAGAAATACGATGAGGCTGAGAAAATGTACCATCTGGGAGTGAAGAGCCTTGCAGAGCCCATGGATGAGCTGCAGAAATCATATGAACAATTCCTTCAACGCATGGAAAGAAAGAATTACAAGAGAATCCAGGATCTCTTTCAGCAGCAAGAAATGAGGGCTACCAGGAGGCCTCTTTCTTCAAAGAACATCCTTCCTCATGGCAATAAGACTGAGGGGAAAAATGAAGCATGCGGTGTTGATAGTGTTTATATAGGACCCCAAGTTGTGAATTCTGTAGCTGAAGGCCTAGCTAATGAAAGACATGTTTGTGGGGATCACACGGTTGTGAACAAATTTGTTGACACTGCGATTGTTGGGAAGTCTGAAGCCGAAAACGCCAGCCATCATGGACTGGTGGATCCTACGATAAATATGAAGGAGGCAATGGAAGCCATTAATAGTATGTTCCGTGAGCCATTAGAGGCTGTTCCAGTAGCCCGAAAATCACACAGAAAGCGGTCAAAGGAAGGTCATTTTACACCGAATGGATTAGAGCTTTTCATTGATAAAAACATGGATAATGGAATCAAACCATCAGTTTCCTCATCTCTGCAGCAGAGTACTGAAGCTAGCCAATCTCACCAAGAACCACTTCAAATATATATTGATGATGAAGGACATAGTGAAACTAGTGACATAAACGAGGAGCAGAGTGTTGTCAGGAATTTGGCAGAAGATATTACTTCGTCTACTTCCCGGTTGAATGCCTTCGTTTTCCCTCGTCCCAAGGATCTTACTTCTGAAAATTCTGGTGACATGGATGCAGAAAGCTCCCGTAATTTAAAGTACAGAGAGGATACAGTCGTTTGCCGATTTGTTGGCTCCACCATTCTGGATGAGCCGGTGGTAGAAAATGTTTGCCACCATGGTTTAGTAGACCCCACAATCAACCTCAAGGAAGCTATGGATGACATAAATAACATGTTTGGGAAGCCAATAGACTTTGTTAGGCGTAAAAGATCAAAGCATCAGGAGAAGGCACCCGACAGCAATAGCAGAAAGGAGTTTGGTGGGTTTTCAATTCTTGCTGATGATGACCAGGAACATCAACAAGGTCCGAAACCACCAAAATTAGCAGGAAAGTCAACAGAGTCTGACTTATTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGACATAAACAAGATGTTTAATATGCCAATGAATTTTTAG 1557 0.4406 MAGEDLFSSLISDIDTYTGKDPLLPWLRGIRKMKDTLSPSTLKEKLPGFLQKCAQTFESDRRYRNDMRYLRVWLHLMDFVDDPISLLRTMEVNHIGTKRCQFYQAYALYYEKTKKYDEAEKMYHLGVKSLAEPMDELQKSYEQFLQRMERKNYKRIQDLFQQQEMRATRRPLSSKNILPHGNKTEGKNEACGVDSVYIGPQVVNSVAEGLANERHVCGDHTVVNKFVDTAIVGKSEAENASHHGLVDPTINMKEAMEAINSMFREPLEAVPVARKSHRKRSKEGHFTPNGLELFIDKNMDNGIKPSVSSSLQQSTEASQSHQEPLQIYIDDEGHSETSDINEEQSVVRNLAEDITSSTSRLNAFVFPRPKDLTSENSGDMDAESSRNLKYREDTVVCRFVGSTILDEPVVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRRKRSKHQEKAPDSNSRKEFGGFSILADDDQEHQQGPKPPKLAGKSTESDLFEPTLLTKEAMDDINKMFNMPMNF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1546 518 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 6 518 IPR015661 GO:0007094
Glsi10g1546 518 ProSiteProfiles BUB1 N-terminal domain profile. 10 169 IPR013212 -
Glsi10g1546 518 SMART mad3_bub1_i 3 127 IPR013212 -
Glsi10g1546 518 MobiDBLite consensus disorder prediction 445 497 - -
Glsi10g1546 518 MobiDBLite consensus disorder prediction 445 459 - -
Glsi10g1546 518 MobiDBLite consensus disorder prediction 304 323 - -
Glsi10g1546 518 Coils Coil 134 154 - -
Glsi10g1546 518 Gene3D - 8 166 - -
Glsi10g1546 518 Pfam Mad3/BUB1 homology region 1 10 127 IPR013212 -
Glsi10g1546 518 FunFam Mad3/BUB1 homology region 1 9 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1546 Glsi-ChrGlsi10 10340077 10342479 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1546 10 10340077 10342479 Glsi10g1546 10 10340077 10342479 ECH