Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1535 ATGAAGCCATCATTCTCACGCTCTTTTTCTTCTTCTTCCCCATCACCTCTCATAAAGACTCGTCTTTCTCCCTTCCTGTTCACCTTATTATTAGTTTTCATCCTCTTCGTTTCCATCCTCTATGGCCACAACTTCCTCTTTATCTTCCGTCAACATCCACAGCTGCAGCCCTACCCCAACACTCCCTTCTCCCTTAACGCCGAATGGCAGCAGAAGGTGCCGTTCGCCGTTGGGAGAACGGAGGAAGGGTGCGATGTGTTCAGCGGGAGGTGGGTTCGAGACGAGTTGACTCGGCCACTGTACGAAGAATCGGAGTGTCCGTACATACAGCCACAGCTGACTTGTCAGGAACATGGACGGCCGGAAAAGGACTACCAGCACTGGAGATGGCAGCCTCACGGTTGCGATCTTCCCAAATTCAATGCCAGTTTGATGCTTGAAACAATTCGTGGGAAGAGGATGATGTTTGTTGGAGACTCCCTGAACAGAGGTCAGTACGTCTCTATGGTTTGCCTTCTCCATCAGCTCATTCCTGAACATGCCAAATCAATGGAAACGTTTGATTCACTCACTGTCTTCACAGCCAAGGAATACAATGCAACGATCGAGTTCTATTGGGCACCATTTCTTCTTGAGTCAAACTCTGATAACGCTGTCATCCATAGGATATCTGATAGGATTGTGAGAAAGGGGTCCATCAATAAGCATGGCCGGCATTGGAAAGGTGTTGATATTATGGTATTCAACACCTATCTTTGGTGGATAACTGGCTCCAAGATGAAGATCTTGCTTGGGTCTTTTGATGATGAAGTAAAGGAGATTGTGCAGCTCTCAACGGAGGATGCTTATCGTATGGCTATGAAAAGTATGCTTAGATGGGTGAAGCTGAACATGAACCCTCAGAAGACAAGAGTCTTCTTCACCAGCATGTCACCTTCTCATGGCAAGGGCATAGAGTGGGGAGGTAATCCAGAAGGCAACTGCTACAATGAAACAACTCCGATTGACGATCCCACATACTGGGGCTCTGATAGTCCGAAAAGCATAATGCAAGTGATTGGTGAAGCGTTCAGCAAATCCAAAGTGCCCATTACATTTCTGAACATCACTCAGCTCTCGAGCTACCGCAGAGATGCACACACTTCAATCTACAAGAAGCAATGGAACCCATTGACTCCTGAGCAATTAGCTAAACCTACTAGCTATGCTGATTGTGTGCACTGGTGTTTGCCTGGCCTTCAAGACACTTGGAATGAGCTTCTATTTGCCAAGCTATTTTATCCTTGA 1287 0.4678 MKPSFSRSFSSSSPSPLIKTRLSPFLFTLLLVFILFVSILYGHNFLFIFRQHPQLQPYPNTPFSLNAEWQQKVPFAVGRTEEGCDVFSGRWVRDELTRPLYEESECPYIQPQLTCQEHGRPEKDYQHWRWQPHGCDLPKFNASLMLETIRGKRMMFVGDSLNRGQYVSMVCLLHQLIPEHAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVIHRISDRIVRKGSINKHGRHWKGVDIMVFNTYLWWITGSKMKILLGSFDDEVKEIVQLSTEDAYRMAMKSMLRWVKLNMNPQKTRVFFTSMSPSHGKGIEWGGNPEGNCYNETTPIDDPTYWGSDSPKSIMQVIGEAFSKSKVPITFLNITQLSSYRRDAHTSIYKKQWNPLTPEQLAKPTSYADCVHWCLPGLQDTWNELLFAKLFYP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1535 428 Pfam PMR5 N terminal Domain 83 136 IPR025846 -
Glsi10g1535 428 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 37 421 IPR029962 GO:0016413
Glsi10g1535 428 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 137 423 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1535 Glsi-ChrGlsi10 10295526 10298966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1535 10 10295526 10298966 Glsi10g1535 10 10295526 10298966 CCT