Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1529 ATGGAGGCTCTCAGGAGCATTCATGCCAATGCCAAACACTCATCCATCTTCTTAGCCATTTTGGTTCTTTCAGCTTCCGCATTTTCTTCCTCAAATGCCAAAGTTCATGAGCACGAGTTTATTGTTCAAGCAACTCCAGTGAAGAGGCTGTGCAAAACCCACAACACCATCACAGTGAATGGCCAATTCCCAGGTCCAACTTTGGAAGTCAATAACGGAGACACTTTGGTCGTCAAAGTCATCAACAAAGCTCGTTACAACGTGACCATCCACTGGCACGGTGTTCGGCAAATGAGAACTGGATGGGCAGATGGACCAGAATTTGTGACTCAGTGCCCTATTCGCCCCGGAGGAAGCTACACCTACCGTTTTACTATTCAAGGACAAGAAGGCACACTGTGGTGGCACGCTCATAGCTCATGGCTAAGAGCCACGGTTTATGGAGCTTTAATCATTCGTCCTAGGGAAGGAGAGACCTACCCTTTCCGTAAGCCAAAGCGCGAGACACCCATTCTTCTAGGGGAATGGTGGGACACAAACCCCATTGATGTTGTGAGGGAGGCCACTCGAACAGGAGCAGCTCCCAACGTCTCTAATGCATATACTATCAATGGTCAACCCGGTGATCTTTACAAGTGCTCTAGCAAAGCCACGACCATTATTCCAATAGACTCCAGCGAGACCAACCTCCTCCGTGTCATCAACGCTGCACTCAATCAACCTCTTTTCTTCACCGTTGCCAACCATAAGCTCACTGTGGTTAGCGCCGATGCCTCCTACCTTAAGCCCTTCACCACCACAGTCCTCATGCTGGGACCTGGCCAAACCACCGACGTTCTCATCACCGGTGACCAACCACCTTCCCGGTACTATATGGCGGCGCGTGCTTACCAATCTGCCCAAAATGCTCCCTTTGACAACACCACCACCACCGCAATTCTTGAATACAAATCCGCCCCTTGTCCTACAAAGGGAGTGTCCAATATTAAACCAATTATGCCCCCACTCCCCGCTTACAACGACACCAACACGGTCACTTCCTTCAGCAGAAAATTCAGAAGTCCCAGGAAAGTTGAGGTGCCCTCTGAAATCGACGAGAGCCTCTTCTTCACAGTGGGTCTGGGACTCAACAAGTGCCCTCCAAATTTCAGAAAAAGGCGATGCCAGGGACCAAATGGGACCCGCTTCACTGCGAGCATGAACAACGTATCTTTTGTGCTCCCAAACAACATTTCTATCCTGCAGGCTCATCACTTGAGAATCCCAGGAGTGTTCACCACTGATTTTCCGTCGAGGCCTCCGGTGAAATTCGATTACACAGGCAACGTGAGCCGGTCGCTCTGGCAACCTGTTCCGGGGACTAAGGCTTACAAGTTGAAATTTGGATCGAGAGTGCAGATTGTGCTACAGGACACCAGCATTTTCACTCCCGAGAACCACCCAATTCATCTTCATGGATATGATTTCTACATCGTAGCTGAGGGGTTTGGAAATTTCAACCCCAAGAAAGATACTGCGAAGTTCAACCTTGTTGATCCACCTATGAGGAACACAGTGGCAGTGCCTGTGAAGGGATGGGCAGTGATCCGATTTGTTGCTGATAATCCAGGTACCTGGCTCATGCATTGCCACTTGGATGTTCATATTAACTGGGGTTTGGCCACAGTGTTCGTGGTAGAGAATGGAGTTGGAAAATTGCAATCCATAGAGCCCCCTCCTGCAGACCTGCCTCTCTGTTAG 1740 0.4966 MEALRSIHANAKHSSIFLAILVLSASAFSSSNAKVHEHEFIVQATPVKRLCKTHNTITVNGQFPGPTLEVNNGDTLVVKVINKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIRPREGETYPFRKPKRETPILLGEWWDTNPIDVVREATRTGAAPNVSNAYTINGQPGDLYKCSSKATTIIPIDSSETNLLRVINAALNQPLFFTVANHKLTVVSADASYLKPFTTTVLMLGPGQTTDVLITGDQPPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSAPCPTKGVSNIKPIMPPLPAYNDTNTVTSFSRKFRSPRKVEVPSEIDESLFFTVGLGLNKCPPNFRKRRCQGPNGTRFTASMNNVSFVLPNNISILQAHHLRIPGVFTTDFPSRPPVKFDYTGNVSRSLWQPVPGTKAYKLKFGSRVQIVLQDTSIFTPENHPIHLHGYDFYIVAEGFGNFNPKKDTAKFNLVDPPMRNTVAVPVKGWAVIRFVADNPGTWLMHCHLDVHINWGLATVFVVENGVGKLQSIEPPPADLPLC 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1529 579 FunFam Laccase 24 154 - -
Glsi10g1529 579 SUPERFAMILY Cupredoxins 32 181 IPR008972 -
Glsi10g1529 579 ProSitePatterns Multicopper oxidases signature 2. 542 553 IPR002355 GO:0005507
Glsi10g1529 579 Gene3D - 13 154 IPR008972 -
Glsi10g1529 579 ProSitePatterns Multicopper oxidases signature 1. 537 557 IPR033138 -
Glsi10g1529 579 Pfam Multicopper oxidase 168 318 IPR001117 -
Glsi10g1529 579 Pfam Multicopper oxidase 429 561 IPR011706 GO:0005507|GO:0016491
Glsi10g1529 579 CDD CuRO_1_LCC_plant 38 154 IPR034288 GO:0005507
Glsi10g1529 579 CDD CuRO_3_LCC_plant 424 562 IPR034289 GO:0005507
Glsi10g1529 579 SUPERFAMILY Cupredoxins 163 355 IPR008972 -
Glsi10g1529 579 Pfam Multicopper oxidase 42 156 IPR011707 GO:0005507
Glsi10g1529 579 PANTHER MULTI-COPPER OXIDASE 35 564 IPR045087 -
Glsi10g1529 579 SUPERFAMILY Cupredoxins 360 579 IPR008972 -
Glsi10g1529 579 Gene3D - 164 357 IPR008972 -
Glsi10g1529 579 NCBIfam laccase 33 579 IPR017761 GO:0046274|GO:0048046|GO:0052716
Glsi10g1529 579 Gene3D - 384 579 IPR008972 -
Glsi10g1529 579 CDD CuRO_2_LCC_plant 170 316 IPR034285 -
Glsi10g1529 579 FunFam Laccase 166 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1529 Glsi-ChrGlsi10 10236671 10239847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1529 10 10236671 10239847 Glsi10g1529 10 10236671 10239847 CCT