Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1519 ATGAAGTCCCATACTCAAGCTCCCTGTGGCAGGGGACCGCCACGTATAAGCGCTTTTCGGCGTGGCAGGCCCTCGTATGCTCCACCGGGGAATCTTCTTCCGCCGCCGCTATTGGGCAACGGAAACCATGTTTCCCGGAGATTTTGGACCACGAACCGCAGCCGTATCAGTTTATCCGCCCGCCCCTCTCGCATTAAGGCTGAGAAATTAGAACGGTCGGACCAGAATGGCGTAGCAGAAAATCTAGCTGAAAATTTGGAGTCATCGAATGGAGCTCGAAGCACCAGGCGAGACGTGTTGGTTGCGCCGTTTCTGGCAATGGGCTCGTCATTTCTGATATCGGCTGCAACGAGGGCTGAGGATACAGTTCCGGTGGCAGCGACGCCGTCGACGACGGAGGTGAAAACAGTAGTGGATTTGCCGGCTTCAAAGCCTGAGGAGCTGAAGAAGAGCGAGGAGGAAGCAATAACGTCGAGGATTTATGATGCGACAGTAATCGGAGAGCCGTTGGCGATTGGGAAAGATAAATGGAAAGTGTGGGAGAAGTTGATGAATGCTCGAGTGGTGTACTTGGGGGAAGCGGAGCAGGTTCCAGTTCGAGACGATAAGGAACTGGAGCTGGATATAGTGAAGAATTTGCACAAGCGATGTATCGAGAATGATAAGCCAATATCTTTGGCTCTTGAAGCATTTCCCTCAAATCTACAGGAGCCGCTCAATCAATATGTGGATAAAAAGATAGATGGAGAAACCTTAAAGTCTCATACCTTACATTGGCCACCTCAACGGTGGCAGGAGTATGAACCTCTTCTTAGCTACTGTCGTGATAATGAAATTCGCCTTGTTGCTTGCGGTACCCCACTATCGGTCTTAAGGACTGTCCAAGCAGAAGGAATTCGTGGGCTTTCAAAGGCCGATCGTAAAATATATGCTCCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTAGTTCTATATCACGTAGATCACCGGTAGATATGACTAGTCCAAATTCATCTGTTCCTTTTGGCCCGCACTCATATCTATCTGTACAGGCAAGAGTAGTTGAGGATTACACTATGTCTCGCATCATCTTACAAAATGTGCCAGAGGGAGGAGCCTCTGGTATGTTGGTAGTTGTGACTGGTGCAAGCCATGTTACATATGGATCTAGAGGAACTGGTGTGCCAGCAAGAATTTCAAGAAAAATGCAGAAGAAAAACCAAGTTGTTATATTACTTGATCCTGAAAGGCAACTCATTCGCAGAGAGGGAGAAGTTCCCATTGCTGATTTCCTGTGGTATTCTCCTGCCAGACCATGTAATAGAAATTGCTTTGATCGTGCTGAGGTTGCCCGGGTTATGAATGCTGCTGGTCGGAGGCGAGATGCCCTCCCACAGGATATTCAAAAGGGAATTGATCTTGGTTTGGTATCACCAGAGGTGTTGCAGAACTTCTTTGATCTAGAGCAGTATCCACTGATTTCAGAACTGACTCATCATTTCCAGGGTTTTAGGGAAAGATTGTTGGCAGATCCCAAATTTTTGCATAGATTAGCCATAGAGGAATCTATATCAATTACAACTACACTATTAGCACAGTATGAAAAACGGAAAGGAAACTTTTTTGAAGAGATTGACTATGTTATTACAGACTCATTAAGAGGAATAGTTACTGATTTCTTTACAGTGTGGCTTCCTGCCCCAACTTTGTCATTTCTTTCATATGCTGATGAGATGAATGCACCTGAAAGCATTGATTCTTTAAGGGGTCTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAGAGTCCTGCAGGGACTAACTGGAATCTCAATCTTCGAGTGGCATCCGTTCTATTTGGTGGCTTAAAACTTGCTAGTGTTGGCTTTATCTCAAGTATAGGAGCTGTCACTTCATCAAATGCATTGTATGCAATTCGTAGGTTCTTTAATCCAGCAGTTATTTCTAATCAACAGATGATTAGATCACCAATACTCAAAACAGCAGTTGTTTATGCATGTTTCCTCGGAATATCTGCAAATCTTCGTTATCAGATTATTGCTGGAGTTGTGGAGCACCGCATTTCTGAACAGTTTTCATCCCAAACATTTCTTGTAAATATGCTATCTTTTATTGCCCGGACAATCAATTCTTATTGGGGAACTCAGCAATGGATTGACCTTGCACGGTCTACTGGACTGCAAGTTAAAAAGACTGAAGCACCCTCCCATCAAACACCAGATTCCCCGAATCATGCTGCAATTGTGTGCAACGAAACAGAAGAAACTAGCGTTGATGAATTACAAAATAAATGA 2316 0.4482 MKSHTQAPCGRGPPRISAFRRGRPSYAPPGNLLPPPLLGNGNHVSRRFWTTNRSRISLSARPSRIKAEKLERSDQNGVAENLAENLESSNGARSTRRDVLVAPFLAMGSSFLISAATRAEDTVPVAATPSTTEVKTVVDLPASKPEELKKSEEEAITSRIYDATVIGEPLAIGKDKWKVWEKLMNARVVYLGEAEQVPVRDDKELELDIVKNLHKRCIENDKPISLALEAFPSNLQEPLNQYVDKKIDGETLKSHTLHWPPQRWQEYEPLLSYCRDNEIRLVACGTPLSVLRTVQAEGIRGLSKADRKIYAPPAGSGFISGFSSISRRSPVDMTSPNSSVPFGPHSYLSVQARVVEDYTMSRIILQNVPEGGASGMLVVVTGASHVTYGSRGTGVPARISRKMQKKNQVVILLDPERQLIRREGEVPIADFLWYSPARPCNRNCFDRAEVARVMNAAGRRRDALPQDIQKGIDLGLVSPEVLQNFFDLEQYPLISELTHHFQGFRERLLADPKFLHRLAIEESISITTTLLAQYEKRKGNFFEEIDYVITDSLRGIVTDFFTVWLPAPTLSFLSYADEMNAPESIDSLRGLLGSIPDNAFQKSPAGTNWNLNLRVASVLFGGLKLASVGFISSIGAVTSSNALYAIRRFFNPAVISNQQMIRSPILKTAVVYACFLGISANLRYQIIAGVVEHRISEQFSSQTFLVNMLSFIARTINSYWGTQQWIDLARSTGLQVKKTEAPSHQTPDSPNHAAIVCNETEETSVDELQNK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1519 771 Gene3D - 172 438 - -
Glsi10g1519 771 SUPERFAMILY EreA/ChaN-like 178 436 - -
Glsi10g1519 771 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 59 770 - -
Glsi10g1519 771 Coils Coil 758 771 - -
Glsi10g1519 771 Pfam Protein RETICULATA-related 506 690 IPR021825 -
Glsi10g1519 771 MobiDBLite consensus disorder prediction 1 39 - -
Glsi10g1519 771 Pfam Haem-binding uptake, Tiki superfamily, ChaN 179 399 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1519 Glsi-ChrGlsi10 10157803 10162525 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1519 10 10157803 10162525 Glsi10g1519 10 10157803 10162525 ECH