Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1516 ATGCCAACTAGCAGGTTCCGCTGCATACAGAGGATAGGATTTAAGAATTCTGCTGTTCTGCTTCCATCCTATAATGTCGAGGTGCATCCAAGGCTCCAGGAGTTATCGAGGATTGTCTCATCTGCCAAAGCCCATAAGCCAAAGCAAGCACAACCCAGATTACCCAACCGGATTGCGACCCCAGCTACTGCAAACTCTGGTGCTATCAAGGTTGAATCTCAGTCAGCAAAGCTGAAGATGGAAAACTCCGAAGGGGAGAAAAATCGGATGCCCCTCGCCCACGTGGTCGCCGATTGTGCGAAGCGGTGGTTCCAGGATACGCTCAAGGAGGCTAAGGCAGGCGACAGCAACATGCAGGTTTTGGTTGGACAAATGTACTACAGTGGCTATGGGGTTCCAAGAGATCCTCAAAAGGGACATGCTTGGATTAGTAAAGCATCAAGAAGTCGAAATTCAGTTTGGAAAATGAGCGAAAAACATCCAGGTTATAGAGCAAGTGACTCAGATTCAGATGAAATGGAGATCAAAGCTAAATAA 537 0.4749 MPTSRFRCIQRIGFKNSAVLLPSYNVEVHPRLQELSRIVSSAKAHKPKQAQPRLPNRIATPATANSGAIKVESQSAKLKMENSEGEKNRMPLAHVVADCAKRWFQDTLKEAKAGDSNMQVLVGQMYYSGYGVPRDPQKGHAWISKASRSRNSVWKMSEKHPGYRASDSDSDEMEIKAK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1516 178 PANTHER EXPRESSED PROTEIN 30 176 - -
Glsi10g1516 178 MobiDBLite consensus disorder prediction 137 178 - -
Glsi10g1516 178 MobiDBLite consensus disorder prediction 152 178 - -
Glsi10g1516 178 Gene3D Tetratricopeptide repeat domain 16 157 IPR011990 GO:0005515
Glsi10g1516 178 SUPERFAMILY HCP-like 105 148 - -
Glsi10g1516 178 SMART sel1 116 151 IPR006597 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1516 Glsi-ChrGlsi10 10146500 10147767 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1516 10 10146500 10147767 Glsi10g1516 10 10146500 10147767 ECH