Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1500 ATGGAAATAGCAGAGGCGTGCAAGACGTCGTCGTTTGTGCGTGTGTTACTGTGGACTTTCCCTTCCAAAAGGCACACTCTAGATCCAAAACCTCAGCCCCACACTGTCATCAACGGAGGAAAGCATCACAAAAGCCTTCTCTGCTGCCGTTTCCTTTTTCTGCTTTCCCGTTTTGCGCTCACTTTACACACCCAGTGGGTTGTGGAGTGTGGACCCGAATGGGTCTGTCTCGGAAGTCCAAGCTTGAGCCTTTTAGCACCTTTAGCTGTGGATGCTTCTCTGAATTTCGCGTTTGCTTTCGTACTTTTTGCAATGGCGGAAACCCAGGAAGCAACCTCCGAGGGGGTTCCGGGAACTCCTGGCATAAGGGAAGTCAGACCCGAGACGGGGTCCGAAAAGCTCCATGCTGGAAACAGGCACGGTGGGAACCCGAATCTGGGGATAAGAAGGGTTAATTTGAGAGCTGAAATTGATACATCGCCGCCGTTCGGATCAGTCAAAGAGGCAGTGACCCGTTTTGGAGGTAGCGGACCTTGGGTACCTCTTTACAAGCTTGGAGAGGCTTTTAATAGCCTTAACGATTTTGACATGAAGAAAATAGAAGAACAAGCAGCGGAGTTGGAGAAGGATTTGATTGTGAAAGAACTTGAAACACTTGATGTGCTTGAAGAACTGGGAGCTACGAAAAGGATAGTGGAGGAATTAAAGCAGCAGCTACAAAAGGAAGCATTGAAGTGTTTTGTAACTCCAGAAGTCCATTCCTGTGAACAGATTGGACCTCCTGTTATAAAGGAGATGAATAAGGAAAATTGTGGAAGTATTGTCAACAACCAAGAACAGATTTTACAGAGTTCAAGCCCCTGCTCTACGTCATCGCCTGATATGATCTTAATGGAGTTAAAACAAGCTAAAGTGAATCTTGGTAAAACTATAAATGATCTTGGGGTGATACAATCATCTGTCGAATCTTTGAATAAGAAGATGAAGAAGGAGAAGATTTTTCTTGAGAGGACACAAGAGAAGCTAGCATCAAATTTTGCTGCTGTCTGTGCTCAAGAGAAAGCCCAAGAACAAACAAAATTAAATCCACCAACAGCACCTGTAGAAATAACTAGCAGCTTTGGTGGTTCCGTAAATATTATGAAGAGTTTCAATTCTGATGTTGGGCAGTACAATAGAATGTTGGAAACAAGGTCTGAAGTTTCAAAGCCCTTGAATGTGTATGAAGAGAATGGATCAAGTATTAAGACTGCTGAGATGAGGTGGTTTGCAGCAAAAAAGATGGAAGAAGCTGCAAGGGCAGCAGAAGCCATTGCTCTTGCTGAAATCAAGGCACTATCTGGTACGGAGAGGTCATCAGGATTTTCCCTTCCAGAACCTGAAAAAGTGACTTTTCCTTTAGGGGAGCGCTCTCCGCTAACCCCGAAAGCTCAAATACCAGAAGAGTCAACCACGAAGAATGTCATCGATTCCAAATTTCAAATTGATGAAATAAGTATTTCTAAACTGACTGTTCTGAAAAAGTTGGAGGAAGCAACAGAAGAAGTTCGGCATAGCAAACAAATCCTAACAGAGGCTCTGAACAGTGTTGAAACTGCGAACAGAAAGCAACATGCTGCTGAAGAGGCTTTGCGAAGATGGATTCCTAGGGATGATCTGAAGGGACAAGCAGTGTATAACTCTATTAAGCGCAACAAGTTCAGTTTAGCTGCAAACTGTCAGAATTCTCCTCTACCGGATGTAACCAGGTCAACGACAGTGAACAATGATCCAAAGCCTGCTTTAAGGCCAACGGTTTCAATGAGAGATGTACTAAGCAGAAAGCAAGTTCCTGATGAATATGCTGCAAGAAATGATATGGAGGAGCATACCGAAAGACAGAAGGTAGCTTTGAGTCAAATGCTCCGTGCATTAAGGGAAGATCTAACTCTTCCTGCAAAAACTGAGAAAGATGGAAGCGAACGAAAGCAGTTCATAGCCCAGAGGAAGAAGTTTGGATTCATCCAAATATCACTCCCCTTGTCAAAGGGAAGTAAGAAAAAGGCATGA 2049 0.4388 MEIAEACKTSSFVRVLLWTFPSKRHTLDPKPQPHTVINGGKHHKSLLCCRFLFLLSRFALTLHTQWVVECGPEWVCLGSPSLSLLAPLAVDASLNFAFAFVLFAMAETQEATSEGVPGTPGIREVRPETGSEKLHAGNRHGGNPNLGIRRVNLRAEIDTSPPFGSVKEAVTRFGGSGPWVPLYKLGEAFNSLNDFDMKKIEEQAAELEKDLIVKELETLDVLEELGATKRIVEELKQQLQKEALKCFVTPEVHSCEQIGPPVIKEMNKENCGSIVNNQEQILQSSSPCSTSSPDMILMELKQAKVNLGKTINDLGVIQSSVESLNKKMKKEKIFLERTQEKLASNFAAVCAQEKAQEQTKLNPPTAPVEITSSFGGSVNIMKSFNSDVGQYNRMLETRSEVSKPLNVYEENGSSIKTAEMRWFAAKKMEEAARAAEAIALAEIKALSGTERSSGFSLPEPEKVTFPLGERSPLTPKAQIPEESTTKNVIDSKFQIDEISISKLTVLKKLEEATEEVRHSKQILTEALNSVETANRKQHAAEEALRRWIPRDDLKGQAVYNSIKRNKFSLAANCQNSPLPDVTRSTTVNNDPKPALRPTVSMRDVLSRKQVPDEYAARNDMEEHTERQKVALSQMLRALREDLTLPAKTEKDGSERKQFIAQRKKFGFIQISLPLSKGSKKKA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1500 682 Coils Coil 506 529 - -
Glsi10g1500 682 Coils Coil 321 341 - -
Glsi10g1500 682 Coils Coil 197 217 - -
Glsi10g1500 682 Coils Coil 222 242 - -
Glsi10g1500 682 Pfam Weak chloroplast movement under blue light 296 547 IPR008545 -
Glsi10g1500 682 Pfam Weak chloroplast movement under blue light 155 241 IPR008545 -
Glsi10g1500 682 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 155 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1500 Glsi-ChrGlsi10 10057416 10060706 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1500 10 10057416 10060706 Glsi10g1500 10 10057416 10060706 CCT
Glsi10g1500 10 10057416 10060706 Glsi10g1500 10 10057416 10060706 ECH