Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1268 ATGACAAAGTTCAATTACAGTTGGTGCGAATTGAGAGAGGAGGGTTTCAGATCTGGAACGAGGAAGAGAAGCGGGAGTTCAACGCACCGTTTTAGACGTACATCAGCTTCCACTGCCATTGTTGATCGCAGCTTAGGGTTCTTTCTCCAGCCCAGCAACTGTATTGAGTTGATTAGCAAGTCCCTTTTGCTGCATTCAGATGATGCGTTTGTTTCCTTCGAATTCTCTCGCAAATTAATCAAAATCACATGCTACCTCACTCTTGCTTCGGCTGAATCAGATATGAGAGGACCCTCCCCAAGCACCGTAGAGCCGCGGCACCGGTTGTCGGCTTCGGCAAATGAAGATACTAACAAGAGAAGATCTCAAAGAAGTAAATACTTTAAAGATGTTGAGAAGGCATTGCATGTCCCATTCCAAGATAGGAGTATAAATTGCAAGCCTACCTGGAAATTGGTTCTGGTTATAATTTTATTGGGAACTTTAGTTACAATTTTCCATCCTCCAGCAATTTATGATACTGGTCCTCTGTCAAACTCTATAAGGGGACCAACCTTTGCAGACAAATGGAAGAGAGGGTTTGATACTACTGATCAACGTTATGTATCCCTTCTAAATATTGAGTGGGGCCAAATATCAAAAGTTCTTGTAAAATTGACAGATAGGAACACATATCAGGGAGTTGGCTTGTTAAACTTTAACGACAGTGAGATTGAACACTGGAAACAGCTGATGCCAGAAGCTGAGCACATAGTCCTGCACCTGAACTACGTTTCAAGTAACATTACATGGGAAGTCCTATACCCTGAATGGATAGACGAAGAAGAAGAATTTGAGGTTCCTACTTGTCCTACACTACCTAGGATTCAAGTATCTGGAAAACCACGGCTTGATCTTGTTGCCATCAAGCTTCCCTGCAACAAGTCAGGAAGATGGTCAAGAGATGTGGCTCGATTGCACTTGCAGCTTGAAGCAGCAAGGGTTGCTGCCTCTTCCAAAGGATATCGTCCAGTGCGTGTGCTTTTTGTCACTGACTGCTTCCCACTCCCAAATCTCTTTACCTGCAAGGAACTGATTCAACGCGAAGGGAGTGCATGGCTTTATGAACCTAACCTGCATATGCTGAGAGATAAGCTGCAACTGCCAGTGGGATCATGTGAATTAGCAGTTCCTCTCAAGGCTAAAGAACATTTTTACTCGGAAAGGGCAAAGCGAGAAGCTTATGCGACCATCCTGCACTCTGCACATGTATATGTTTGTGGAGCCATTGTTGCAGCTCAGAGTATTCGCATGGCTGGTTCAACACGAGATTTTGTGATTTTAGTTGATGAAACAATTAGCGACTATCATAGGGGGGGCTTGGAGGCTGCTGGATGGAAGATTCATACAATCCAAAGAATCAGGAACCCAAAAGCTGAACCAGAGGCATATAATGAATGGAACTATAGCAAATTCCGCCTCTGGCAGCTAACAGATTATGATAAAATCATTTTCATTGATGCTGACCTGCTTATACTCAGAAATATTGATTTCCTCTTTGAGATGTCTGAAATATCAGCAATAGGAAACAATGCTACCCTTTTCAACTCAGGTGTAATGGTAATTGAACCATCGAATTGTACATTTCAACTACTAATGGATCACATCGATGAGATTGTCTCCTACAATGGTGGGGACCAGGGGTATCTGAATGAAATATTCACATGGTGGCATCGGATTCCAAAACATATGAACTTTTTGAAGCACTTCTGGGAAGGTGATGAGGAAGAGAGAAAAGAGATGAAAACTAGTCTCTTCGGAGCTGATCCTCCAATTCTTTATGTCATCCATTATCTGGGTAATAAACCCTGGCTATGCTTCCGAGATTATGACTGCAACTGGAACGTGGACATTCTGCAGGAGTTTGCAAGTGATGTGGCTCATGCGAGATGGTGGAAGGTGCACGATGCCATGCCAGAAAACTTACAGAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCAGCATTAGAGTGGGATCGTAGACAAGCAAAGAAAGGAAACTACAGTGATGGTCACTGGAAAATTAAGATAAAAGACAAGCGTTTGAAAACATGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAAAGAATTGGACAGATAATGCTACTGTTAAGAATTCACCACCTGCTATCACTACCAAATCTCTCTCTTCTTTATAA 2217 0.429 MTKFNYSWCELREEGFRSGTRKRSGSSTHRFRRTSASTAIVDRSLGFFLQPSNCIELISKSLLLHSDDAFVSFEFSRKLIKITCYLTLASAESDMRGPSPSTVEPRHRLSASANEDTNKRRSQRSKYFKDVEKALHVPFQDRSINCKPTWKLVLVIILLGTLVTIFHPPAIYDTGPLSNSIRGPTFADKWKRGFDTTDQRYVSLLNIEWGQISKVLVKLTDRNTYQGVGLLNFNDSEIEHWKQLMPEAEHIVLHLNYVSSNITWEVLYPEWIDEEEEFEVPTCPTLPRIQVSGKPRLDLVAIKLPCNKSGRWSRDVARLHLQLEAARVAASSKGYRPVRVLFVTDCFPLPNLFTCKELIQREGSAWLYEPNLHMLRDKLQLPVGSCELAVPLKAKEHFYSERAKREAYATILHSAHVYVCGAIVAAQSIRMAGSTRDFVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMSEISAIGNNATLFNSGVMVIEPSNCTFQLLMDHIDEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEERKEMKTSLFGADPPILYVIHYLGNKPWLCFRDYDCNWNVDILQEFASDVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAKKGNYSDGHWKIKIKDKRLKTCFEDFCFWESMLWHWGEKNWTDNATVKNSPPAITTKSLSSL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1268 738 MobiDBLite consensus disorder prediction 109 125 - -
Glsi10g1268 738 Pfam Glycosyl transferase family 8 412 618 IPR002495 GO:0016757
Glsi10g1268 738 CDD GT8_Glycogenin 406 651 - -
Glsi10g1268 738 FunFam Hexosyltransferase 403 655 - -
Glsi10g1268 738 MobiDBLite consensus disorder prediction 92 125 - -
Glsi10g1268 738 SUPERFAMILY Nucleotide-diphospho-sugar transferases 405 656 IPR029044 -
Glsi10g1268 738 PANTHER GLYCOGENIN SUBFAMILY MEMBER 314 698 - -
Glsi10g1268 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 403 654 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1268 Glsi-ChrGlsi10 8548587 8553939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1268 98 714 Glycosyltransferase AT1G77130 70.626 0.0 894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1268 10 8548587 8553939 Glsi10g1268 10 8548587 8553939 ECH