Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1263 ATGATAACAGCAGATGATTTCTACAAGGTTATGTGTGCTACGGTTCCCCTTTACTTCGCCATGCTCTTAGCCTACGCTTCTGTCAAATGGTGCAAGATATTCACACCTGACCAGTGCTCTGGCATCAACCGCTTCGTGGCTGTCTTCGCCGTCCCCGTTCTCTCCTTCCACTTCATTTCTCAGAACAACCCCTACCAAATGGACACCAAATTCATAATCTGTGACACTATCTCTAAGCTTCTCGTCCTAGTCTTCCTCTCTCTATGGGCTATCTTCTTCTCCGCCGGAACCTTGGATTGGCTCATCACTCTCTTCTCCCTTGCCACTTTGCCTAACACTCTCGTTATGGGCATCCCTTTGCTCCAAGCCATGTACGGCGACTTCACCCAGACCCTCATGGTGCAACTTGTCGTACTTCAATGCATCATATGGTACACACTTCTGCTGTTCTTGTTTGAATACAGAGCTGCGACCCTTTTGATTCACTCCCACTTCCCTGGCCCTACTGCTGCCTCTATAACCAAATTCGAGATCGACGGCGATGTCATCTCCCTCGACGGTCGCGACATGCCCCTCCGAACCGAATCCGAAACCGACAACCATGGACGTATCCGTGTCCGTATCCGACGCTCCACGTCCTCTGCTCCTGACTCCGCATTATCTTCATCCATGGGCATCACTCCCAGGCCCTCCAACCTCTCCAACGCAGATATCTTCTCCGTCAACACTCCACTTCAGCTGCACGAGTTTCGCCATGCTGTTGCGGAGGCGACGACTGGAGGCAGTCACGATATCGTGTTTGGTCATGGAGATCTGGGATTCGGGTTCCCGTCCGCAAGCCCTCGTTTATCTGGGTACGCGTCGTCGGATGCATACTCGCTCCAACCGACGCCACGGCCCTCAAATTTTAACGAACTGGAGACGACCACCACGACTAGCACGCCGGTACGGGCGAGGTCTCCGGTTTCCGGCGGTAGGATTTACAGGCAATCGCCCCTAGCATTTCCGGGAGGGAGGGTGGTGTGTGAGTCGCCGCAGGGGAAGTGTCAAGGCGGAGATAGACAAGGATGCAAAGACATTACAGTGTCTCTGTCAGAGAAAGAAATTAGCTTTAGAGACATCACCAAAATCCCAATGCCGGAGGAAACTGGTGGTCCCAATAAAGATGCGCAAGAAATGCCACGAGTTCTTGTGATGACGAGGCTTATACTTGTGGTGGTAGGAAGGAAACTGTCCCGGAACCCTAATACATATTCTAGTGCATTAGGGCTTCTTTGGTCTCTAATCTCCTTCAAATGGAATGTGGGAATGCCTATTTTGGTAAAATCGTCTATCAAAATAATATCTGATGCAGGACTTGGGATGGCCATGTTCAGCTTAGGGCTATTCATGGCCCTTCAGCCACGGATAATTGCGTGCGGCACCAAAAGAGCAGCCATGGGAATGGCTATACGCTTCATATGCGGGCCCGTAGTTATGTCTGCGGCTTCCATTGCTATGGGATTGAAAGGACCTAAACTGCATGCTGCCATTGTCCAGGCTGCTCTTCCTCAAGGGATAGTGCCATTTGTGTTTGCAAGGGAATATGGGCTGCATCCTGATATTTTAAGCACGGGGGTTATCTTCGGCATGTTAGTTTCCCTACCCGTGACGCTGCTATATTACATATTGCTTGGCCTCTGA 1683 0.5092 MITADDFYKVMCATVPLYFAMLLAYASVKWCKIFTPDQCSGINRFVAVFAVPVLSFHFISQNNPYQMDTKFIICDTISKLLVLVFLSLWAIFFSAGTLDWLITLFSLATLPNTLVMGIPLLQAMYGDFTQTLMVQLVVLQCIIWYTLLLFLFEYRAATLLIHSHFPGPTAASITKFEIDGDVISLDGRDMPLRTESETDNHGRIRVRIRRSTSSAPDSALSSSMGITPRPSNLSNADIFSVNTPLQLHEFRHAVAEATTGGSHDIVFGHGDLGFGFPSASPRLSGYASSDAYSLQPTPRPSNFNELETTTTTSTPVRARSPVSGGRIYRQSPLAFPGGRVVCESPQGKCQGGDRQGCKDITVSLSEKEISFRDITKIPMPEETGGPNKDAQEMPRVLVMTRLILVVVGRKLSRNPNTYSSALGLLWSLISFKWNVGMPILVKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMAIRFICGPVVMSAASIAMGLKGPKLHAAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYILLGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1263 560 MobiDBLite consensus disorder prediction 287 319 - -
Glsi10g1263 560 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 560 - -
Glsi10g1263 560 Pfam Membrane transport protein 10 555 IPR004776 GO:0016020|GO:0055085
Glsi10g1263 560 MobiDBLite consensus disorder prediction 287 323 - -
Glsi10g1263 560 NCBIfam auxin efflux carrier 1 560 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1263 Glsi-ChrGlsi10 8515616 8519971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1263 1 538 Organic Solute Cotransporters AT1G77110 67.314 0.0 722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1263 10 8515616 8519971 Glsi10g1263 10 8515616 8519971 ECH