Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1245 ATGGTTAAGGAAGCGGAGTATTATGATATCCTTGGGGTTAGTCCCTCTGCATCCGAAGAGGAAATTCGAAAGGCTTATTACCAGAAGGTTTTGGGTGAAGTTTATCAAATTTTGAGTGATCCAGTGCAAAGAAATGCATACGATCAAAATGGAAAGCATTCCGTGTCTAGAGAAACTATGCTTGACCCCACGGCTGTCTTTGCCCTGCTCTTTGGAAGTGAATTATTTGAGGACTACGTAGGGCATCTAGCTGTGGCATCAATGGCTTCTTCTGAAATGGCTGATGAAAGTGATGTTTCTCATAAACTACATGAAAAATTGAAGGCGAGTATGTTTTACAATTCAGCTATCCAAAAAGAAAGGGAAGAAAAACTAGCAAGATTCTTAAAAGATTTTCTTGGTCAATATGTCCGTGGAGACAAAAAAGGATTCTTCCAGCGTGCAGAATCTGAAGCCAGACGGCTTTCTAATGCAGCTTTTGGAGTAGATTTGTTACGCACCATCGGCTATATATATTCAAGACAGGCAGCACTAGAACTAGGGAGAAAAGCCATTTATCTTGGAGTGCCATTTCTGGCTGAATGGGTTCGAAATAAAGGACATTTCTGGAAATCACAGTTCACGGCTGCTAAAGGTGCTTTTCAGTTACTTCAGCTTCAAGAAGACATCCGCAAGCAAAATAAATTGGATGTTAGTGGCCCTGAAAATGATGTTGAATCTCATATTCGCCTTAATAAGGATACACTGATGAATTCTTTATGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTTGTACATGTTTGTCAAATGGTCGTAAGGGAAAATAACGTTAAGAAAGAAGAACTTAAAGCTCGTGCTAACGCTCTCAAAATTCTTGGGAAAGTGAAACAAGGTATCATCTGGTACAATGATGGGAAACTACTTTTTTGTTTAGTAACTAAAGAAATGATGGGATTTCTTCAGGAAAAGAATTCAAAAGGAGCAGCAACGTCGAAGAAGAAAATTGCAGCTGATTCTGATGATGAAGGAAGCGGTTCTGATTCTTCTGAGGATGATGAATCACCAAGAGCACTTTCCTACAGAACGCCCTTTTTCACTCAGGGTATAGGTAGGCTCTTTAAATGCCTTTGTAATCCAGCATTTGACGTGGATGATGAAGAGATAGTTTACAGGAGCAAATGA 1185 0.3958 MVKEAEYYDILGVSPSASEEEIRKAYYQKVLGEVYQILSDPVQRNAYDQNGKHSVSRETMLDPTAVFALLFGSELFEDYVGHLAVASMASSEMADESDVSHKLHEKLKASMFYNSAIQKEREEKLARFLKDFLGQYVRGDKKGFFQRAESEARRLSNAAFGVDLLRTIGYIYSRQAALELGRKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAFQLLQLQEDIRKQNKLDVSGPENDVESHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVVRENNVKKEELKARANALKILGKVKQGIIWYNDGKLLFCLVTKEMMGFLQEKNSKGAATSKKKIAADSDDEGSGSDSSEDDESPRALSYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYRSK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1245 394 ProSiteProfiles dnaJ domain profile. 6 51 IPR001623 -
Glsi10g1245 394 Gene3D DnaJ domain 1 53 IPR036869 -
Glsi10g1245 394 SMART dnaj_3 5 43 IPR001623 -
Glsi10g1245 394 MobiDBLite consensus disorder prediction 331 357 - -
Glsi10g1245 394 CDD DnaJ 6 40 IPR001623 -
Glsi10g1245 394 Pfam X-domain of DnaJ-containing 118 298 IPR026894 -
Glsi10g1245 394 SUPERFAMILY Chaperone J-domain 2 81 IPR036869 -
Glsi10g1245 394 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1245 Glsi-ChrGlsi10 8419552 8423713 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1245 10 8419552 8423713 Glsi10g1245 10 8419552 8423713 ECH