Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1229 ATGAGAGTAGTTGGAGCACAAAGGTGGTCAAATATTTCTGGAACACAATCATGCCCAAGTATTGTAGCTTTTGGAAACCTTTGCACTCTGATTTACCCATACAGGAGTTTTGCAGCAAGTTTCCACCATTCCCATTATGTACCAAATCCCAATCGACCCAAACAAGTTGGGCCTAATGGGCAGCAAAATTATCGAGAAGCACCGAAAAGGGAAGACGTGGAAGAGAAGCAGGAGGCGAAGACGAGGAGAATTCGGAAACAGAGGTCTGTGTTTGGCGGAGCAAAGAAGGAAATGAAAGTGACATGGAAGAAGAACAAGAAACGCTCTTTGTCGGCGGTGTCTCACTTCAGTAATCTCCCTTTTGAGCATCAACAGGAGAACGATGTTTCTCTGCAACACGAAGCTCCTACACAGTCCAATAAAGATGCTGAAAATAGTGCTCACAATTCTGACCAATCCAAAGACCTAAATAGTGCCCATCACTCTGACTTGTCGCAAGCAAGACGGCTAGCCGAAGAATTTCAAGCTCAGGGAGACAAGCTTGCCGAGGATGGGAAGTACCGGGAAGCCTTAGGTAAATGGGAGTCTGCTCTTACATTGACTCCTGAAGCTGCAGTTATACATGAACAAAAGGCCCAAGTTCTGCTAGAAATTGGAGATGCTTGGAATGCTTTAAAGGCCGCAAAACGAGCTACTGAATTGGAGCCATCATGGGCTGAGGCATGGGTCACGCTTGGCAGGGCACAGCTAAATTTTGGTGAGCCTGATAGTGCTGTTGAGAGCTTTGACAGAGCCCTGTCTATCAAGCCTGATTGCGAGGAAGCTAGAGAAGACAGGAAAACTGCATTACATCTTGTAAAGAAGAGAAAGCAACTCCACTCCTCAGGCTTGAGTATTACTGAAAATCGTTATGCGGTAGGTGATAAGGATGACAGCTCCTGA 942 0.4607 MRVVGAQRWSNISGTQSCPSIVAFGNLCTLIYPYRSFAASFHHSHYVPNPNRPKQVGPNGQQNYREAPKREDVEEKQEAKTRRIRKQRSVFGGAKKEMKVTWKKNKKRSLSAVSHFSNLPFEHQQENDVSLQHEAPTQSNKDAENSAHNSDQSKDLNSAHHSDLSQARRLAEEFQAQGDKLAEDGKYREALGKWESALTLTPEAAVIHEQKAQVLLEIGDAWNALKAAKRATELEPSWAEAWVTLGRAQLNFGEPDSAVESFDRALSIKPDCEEAREDRKTALHLVKKRKQLHSSGLSITENRYAVGDKDDSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1229 313 MobiDBLite consensus disorder prediction 125 153 - -
Glsi10g1229 313 MobiDBLite consensus disorder prediction 125 165 - -
Glsi10g1229 313 SUPERFAMILY TPR-like 168 290 IPR011990 GO:0005515
Glsi10g1229 313 PANTHER OSMOSIS RESPONSIVE FACTOR 98 312 - -
Glsi10g1229 313 MobiDBLite consensus disorder prediction 48 104 - -
Glsi10g1229 313 Coils Coil 164 184 - -
Glsi10g1229 313 ProSiteProfiles TPR repeat profile. 171 204 IPR019734 GO:0005515
Glsi10g1229 313 Gene3D Tetratricopeptide repeat domain 161 301 IPR011990 GO:0005515
Glsi10g1229 313 Pfam Tetratricopeptide repeat 239 276 - -
Glsi10g1229 313 MobiDBLite consensus disorder prediction 65 99 - -
Glsi10g1229 313 ProSiteProfiles TPR repeat region circular profile. 239 271 - -
Glsi10g1229 313 ProSiteProfiles TPR repeat profile. 239 272 IPR019734 GO:0005515
Glsi10g1229 313 SMART tpr_5 171 204 IPR019734 GO:0005515
Glsi10g1229 313 SMART tpr_5 239 272 IPR019734 GO:0005515
Glsi10g1229 313 SMART tpr_5 205 238 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1229 157 286 Glycosyltransferase AT3G04240 25.385 2.27e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1229 10 8287531 8291752 Glsi10g1229 10 8287531 8291752 ECH