Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1225 ATGAAATTCTTAGGCACTTCACCCACTGATCTGCTTAAAACCTCTGCTTTCGTTAGAGTTATCGCCTTTACTCTCTTCTCTCTGTCCCTCGTATTTGTCTTGAACCATTACTCTTCCACTTACTCCTCCCTTACCTTCTCCACTTCCGGTTACTTCAACTCTTCTTCTATTGGGTCGTCGCCGGAACAATCTCTGGCCTCACCGCCTCGCAAGAAAATATTCCGGCTTCCTCCGCTGCCGCCCGTGGAGAGGATGGGCATTGTCGACGACAATGGTGTGATGTCGGATGACTTCAAAATTGGGGAGTTTGATGCGAGTTTGGGCCAGGATTTGGGGAATTTGAGTGAGAAACAAGAGGTGAAGGAGGGGGGAAGTGGTGTTAGAGTTAGGGTTGAGAGGTATAAGGTGTGTGATCCGAGCATGGTTGATTATATACCTTGTTTGGACAACAAGGAAGCGATTAAGAGGCTCAACTCAAGTGAGAGAGGAGAACAGTACGAGCGTCATTGTCCAGAGGAAGGGAAGGGGCTGAACTGCTTGGTGCCATTTCCCAAGGGGTACCGGAGTCCAATACCTTGGCCAAAGAGCAGAGATGAGGTCTGGTTCAGCAATGTACCCCATACACGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGCTATCAATAAAGAAGGATAAATTTGTTTTTCCTGGTGGTGGAACACAATTCATCCATGGTGCTGATAAATACCTTGATCAAATTTCAGCGATGGTTCCTGACATTGCATTTGGTTACAACATCCGAGTTGCTTTAGACATTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTGATGCAACGCAATGTTACCACTCTTTCAATAGCACCAAAAGATATTCACGAAAACCAGATTCAGTTTGCTCTAGAGCGCGGTGTTCCTGCCATGGTAGCTATATTTGCTACACACCGTTTGTTGTTCCCAAGCCAGGCTTTTGACTTGATCCATTGTTCAAGATGTAGAGTCAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGTCAATAGGCTGCTGAGGGCAGGTGGCTACTTTGTCTGGGCAGCACAACCTGTTTACAAGCATGAAGAGATCCTTCAAGAACAATGGAAAGAAATGAAGGTCCTGACTACTCGCATTTGTTGGGAACTTGTGAGGAAGGAGGGTTACATTGCTATATGGCGGAAACCTATGAACAATAGTTGCTACCTTAGTCGTGACATTGGCGTGCAGCCTCCATTATGTGGCTCTAATGATGATCCAGATGATGTTTGGTATATTGGTCTTAAGGCATGCATTACTCAATTGCCTAGTAATTATGGAGCTAATGTTACAGAGTGGCCTGCACGCCTTCATCAATCACCAAACAGGCTTCAAAGCATTAAATTGGATGCCTATATATCCAGAAAGGAACTCTTCAAGGCTGAATCTAAATATTGGAATGAAATAATTGATAGCTATGTTCGAGCTTACCATTGGAAGGAGTACAACCTAAGAAATATAATGGACATGAGGGCTGGTTTTGGGGGGTTTGCTGCAGCACTGCACGATCTTCAGATTGATTGTTGGGTTATGAATGTTGTTCCTGTTAGCGGATATGATACCTTGCCTGTTCTATATGACCGTGGACTAATAGGAGTTATGCATGATTGGTGCGAGCCATTCGACACATATCCAAGAACATATGATCTGCTGCATGCAGCAGGTCTTTTCTCTGTTGAGAAAAAGAGGAAAAGGTGTAATGTCTCAACCATCATGCTGGAGATGGATCGAATGCTAAGACCAGGCGGGCGTGTATATGTACGTGACTCCATACATGTTATCAGTGAACTTGAAGAAATTGCAACTGCCATGGGATGGGTGAATTCCCGGCATGATGTCGGTGAGGGTCCCTATGCAAGCTGGAAGATATTAAGGTGTGAGAAGCGCTTCTAA 1950 0.4492 MKFLGTSPTDLLKTSAFVRVIAFTLFSLSLVFVLNHYSSTYSSLTFSTSGYFNSSSIGSSPEQSLASPPRKKIFRLPPLPPVERMGIVDDNGVMSDDFKIGEFDASLGQDLGNLSEKQEVKEGGSGVRVRVERYKVCDPSMVDYIPCLDNKEAIKRLNSSERGEQYERHCPEEGKGLNCLVPFPKGYRSPIPWPKSRDEVWFSNVPHTRLVEDKGGQNWLSIKKDKFVFPGGGTQFIHGADKYLDQISAMVPDIAFGYNIRVALDIGCGVASFGAFLMQRNVTTLSIAPKDIHENQIQFALERGVPAMVAIFATHRLLFPSQAFDLIHCSRCRVNWTRDDGILLLEVNRLLRAGGYFVWAAQPVYKHEEILQEQWKEMKVLTTRICWELVRKEGYIAIWRKPMNNSCYLSRDIGVQPPLCGSNDDPDDVWYIGLKACITQLPSNYGANVTEWPARLHQSPNRLQSIKLDAYISRKELFKAESKYWNEIIDSYVRAYHWKEYNLRNIMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGYDTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRKRCNVSTIMLEMDRMLRPGGRVYVRDSIHVISELEEIATAMGWVNSRHDVGEGPYASWKILRCEKRF 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1225 649 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 477 631 IPR029063 -
Glsi10g1225 649 Gene3D Vaccinia Virus protein VP39 248 401 IPR029063 -
Glsi10g1225 649 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 119 633 IPR004159 GO:0008168
Glsi10g1225 649 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 143 647 IPR004159 GO:0008168
Glsi10g1225 649 CDD AdoMet_MTases 264 358 - -
Glsi10g1225 649 FunFam probable methyltransferase PMT3 239 402 - -
Glsi10g1225 649 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 167 394 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1225 Glsi-ChrGlsi10 8257559 8262198 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1225 10 8257559 8262198 Glsi10g1225 10 8257559 8262198 ECH