Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1217 ATGGAGGAGGAGAAGGCTCCTCTTAGTGGTGGTGGCGATTCGTCGAGGTCTTCATCCTCGTTTGTGAAAAAGGGCGACCGTCAAATGTTTACCGTGGAGCTCCGGCCTGGAGAGACCACTATAGTCTCTTGGAAGAAGCTAATGAAAGACGCTAACAAGGTTAATGGATCCACTATAGCCCCTGAACATCCCACCACTGCACACCCCGCCCTGGAGTCCAGAATCGCTCCGGGACAGCCTACTGAAAGTGACGCAACAGATCCTGCTTTTCCACACCGTTTCAGTGCTGTAGTAGAGAAGATTGAACGCCTTTACATGGGTAAGGATAGTAGTGATGAGGAGGATCTACCTGATGTTCCTGATGATGATCAATATGATACAGAAGACTCTTTCATTGATGATGCTGAGCTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGATTCTTTGTGAACAGGGGAAAATTGGAACGCATAAATGAACCTCTGGTATTGCCTAACCAGCAACCAAAGAAAAGACGCAGAAAAGATCTGTTGAAGAATCCTGGTGAAAATTATGATGGTCAAGGATTAAACAAGCATGTAAAAGTGGAAAAGACTGCAGATGGAAAGACAACATCATTAGCCGTGAAGAATACATTGAATTCCTCACAGAATTTTCCTATACCTATTGAACATTATAATAACTCAAAAGCTCGGAATCAATCAGAAGTCTCTGGAATTTGTTCAAGGAAGAAAACTGCTGATACTAAACCAATATTAGATCCTCCTGTTTCTTTGAAAGCATCAAATGACGATGCTCCTGCATCTGTGACAGAAGCAAAGGATATTGATAAACAGAAGATAGGACTCTTTCAATCTAGGAATGTGAGTGACAAATACAAAGATGCAAGTAGATCGTTCGATGCTTCTCATAAGAAATACCATGAAAAAAGTGCTTGTGCACATTCTAAATCCCAACCTGGAAGACCTTCAAGTATTATTGATGATTTGGAAAATAAAGTTCGGTCAAAAGAAAAAAATGGCATCCGTGAACTGCCAGATCTTAACTTGTCTGAGGGAAAGTCTGCCATGCAAGTAACTAAATCACCATATATGTACAAGAAAGAAGGTTCTAGTGTTAGGCCAAAAACTTCAATACTTGAAAAGGCTATTAGAGAGTTAGAGAAGATGGTTGCAGAATCAAGGCCACCTGCAATGGAAAACCAGGAAGCTGATACTACATCCCAGGCAGTCAAAAGGAGGTTGCCTAGAGAAATAAAGCTAAAACTTGCTAAAGTCGCTAGATTAGCGCAGGCAAGCCATGGAAAAGTATCAAAGGAGTTAATTAACCGTCTTATGAGTATTCTAGGGCACCTGATTCAGCTCCGAACATTAAAGAGAAACTTAAAAGTCATGATCAGTATGGGTCTGTCAGCAAAGCAGGAGAAAGATGATAGGTTCCAAAAAATAAAGGAGGAAGTTATTGAGATGATTAAGATGCAAGCCCCTTCTCTGGAACCCAAGCAACAGCAACAAGCTGGAACATCTGGCGATTTTCAAGAAATTGGTCCTGATGAAAAAGAATTAAATATAAGGAAATTCAGGATGGACACTGCATTGGAGGACAAGATCTGTGATCTCTATGACCTCTTTGTTGATGGATTGGATGGTGATGCAGGTCCACAAATCAGAAAGTTGTATGCTGAGCTTGCGGAGTTATGGCCCAATGGTTGCATGGACAACCATGGGATTAAACGTGCAATTTGCAGGGCCAAAGAGAGGCGCAAAGCCCTGTACAGCAGACACAAGGATCAAGAAAAAATTAAGAGTAAAAAAATGTTGGCACCTCAGCTAGAGGAGACTGTTCGATTTGATGCTAGTTCAGTTGCTTCGCAACAGAACACGCGCGAGAGATTAGCACCAGAATCTAGCAGTCATGCATTTACTTCAGTGAGCAAGCCAGTTTCTAATACAATTACCGCCGTACGGGTCCCCAGTCCTTCAATGAATGGTCCAAAGCAGGAGAAAGCAAAGGGAAGTTCAAGCAATTCCCTGGATGATGTTAGCACTGCAGATGGTGTTTTAACAAAGAAGAAGGTAAAGAGGAAACCTGCATTGGAGTTGGAAGGAACTCAAATTCGTCCAGAGAAGGTTGCTTCTTTGCAGGGAGAAGAAAGGCCCAGATCTCTAAAGCAGTCTGCAGGTCTTTCCCTCAAATCAAATCTTCAGCATACATCTCTTCCAGGTCTTGAACAGTCAAGCTAA 2259 0.4205 MEEEKAPLSGGGDSSRSSSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDANKVNGSTIAPEHPTTAHPALESRIAPGQPTESDATDPAFPHRFSAVVEKIERLYMGKDSSDEEDLPDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPLVLPNQQPKKRRRKDLLKNPGENYDGQGLNKHVKVEKTADGKTTSLAVKNTLNSSQNFPIPIEHYNNSKARNQSEVSGICSRKKTADTKPILDPPVSLKASNDDAPASVTEAKDIDKQKIGLFQSRNVSDKYKDASRSFDASHKKYHEKSACAHSKSQPGRPSSIIDDLENKVRSKEKNGIRELPDLNLSEGKSAMQVTKSPYMYKKEGSSVRPKTSILEKAIRELEKMVAESRPPAMENQEADTTSQAVKRRLPREIKLKLAKVARLAQASHGKVSKELINRLMSILGHLIQLRTLKRNLKVMISMGLSAKQEKDDRFQKIKEEVIEMIKMQAPSLEPKQQQQAGTSGDFQEIGPDEKELNIRKFRMDTALEDKICDLYDLFVDGLDGDAGPQIRKLYAELAELWPNGCMDNHGIKRAICRAKERRKALYSRHKDQEKIKSKKMLAPQLEETVRFDASSVASQQNTRERLAPESSSHAFTSVSKPVSNTITAVRVPSPSMNGPKQEKAKGSSSNSLDDVSTADGVLTKKKVKRKPALELEGTQIRPEKVASLQGEERPRSLKQSAGLSLKSNLQHTSLPGLEQSS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1217 752 MobiDBLite consensus disorder prediction 105 126 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 623 688 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 623 752 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 55 90 - -
Glsi10g1217 752 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 11 715 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 167 195 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 312 345 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 11 25 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 172 186 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 731 752 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 690 708 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 252 271 - -
Glsi10g1217 752 MobiDBLite consensus disorder prediction 1 28 - -
Glsi10g1217 752 Pfam HPC2 and ubinuclein domain 119 161 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1217 Glsi-ChrGlsi10 8174504 8182634 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1217 10 8174504 8182634 Glsi08g1088 08 8010881 8019605 CCT
Glsi10g1217 10 8174504 8182634 Glsi10g1217 10 8174504 8182634 ECH