Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1176 ATGAGTGCCTACATTGTTGGTGTCCTCGTTCCTCTGGCGGTTACCATTCTATTCCGGAATTCCAAGAGTGCGAAAAGACGTGGAGTGCCGGTCGATGTTGGTGGTGAACCTGGGTTTGCAATGCGGAATCATCGCTTTACTTCCCCGGTCACTACAGCCTGGGAAGGTGCAACAACTCTTGCAGAACTTTTTGAGCTGGCATGTAAGCAGCATCAAGACAGATACTTGCTTGGGACCCGGAAGTTGATCTCAAGGGAGGTTGAAATAACTGAAGATGGAAGGTCCTTTGAGAAGCTGTCTTTGGGAGACTATGAATGGTTGACATATGGGAAAACATTTGAAGCTGTCTGTAATTTTGCCTCTGGTTTAGCAAAGATTGGGCATGTAAAGGAAGAACGTGTAGCAATCTTTGCTGACACAAGGGAAGAATGGTTTATTGCATTACAGGGTTGCTTCAGGCGAAATGTCACAGTTGTGACTATGTATTCATCATTGGGAGATGAAGCTTTATGTCATTCGTTAAATGAGACAGAGGTTACGACTGTGATTTGTGGGCAAAAAGAATTGAGGAAACTGGTACATGTAAGTGGACAACTTGACACAGTGAAACGTGTGATATGCATGGAAGATGAAATCCCATCTGACACCTCATCTATTGAGCATGGCTGGACAATCACTTCCTTTGCTGATGTTGAGAGACTTGGGAGAGAAAATCCCATTGATGCTGATTTACCTCTTTCAGCAGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTGGCTAAGGGAGTGATGATGACCCATGGCAATGTCTTAGCAACAGTCTCTGCTGTCATGACAATTGTTCCTGACATCGGGAGAAAGGATATTTACCTAGCTTACTTACCAATGGCTCATATTCTTGAATTAGCAGCTGAGAATTTGATCGCAGCTGTTGGAAGTGCTATAGGATATGGATCTCCTTTGACTCTTACTGATACTTCAAGCAAGATAAAAAAGGGAACAAAGGGGGATGCCACTGCATTGATGCCAACTTTAATGGCAGCTGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTGCAAAAGAAGGTAAATGCAAAGGGAGGATTATCCAAAAAATTGTTTGATTTAGCCTACACACGTAGGTTGCATGCAATTAATGGTAGCTGGTTTGGAGCTTGGGGCTTGGAAAAGGCTATCTGGAACGTACTAGTGTTCAAAAAGGTCAGAGCAGTTCTGGGTGGTCGCATCCGTTTTGTACTGTCTGGTGGTGCTCCCCTTTCTGGCGATACCCAAAGATTCATCAATATTTGTCTAGGTGCTCCAATAGGTCAAGGATATGGCCTCACAGAAACTTGTGCTGGTGGGACCTTCTCTGATTTTGATGATACATCTGTTGGTCGTGTTGGACCACCTCTTCCTTGCTCATTTATTAAGTTAATTGATTGGCCTGAAGGCGGATATTTAACCATTGATTCACCAATGCCCCGGGGTGAAATCGTAATTGGTGGTCCAAATGTCACTCTTGGATACTTCAAAAATGAAGAAAAGACAAAAGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTCTACACTGGTGACATAGGGAGATTCCATGCTGATGGTTGCCTTGAGATTATTGATCGTAAAAAGGACATAGTTAAACTGCAGCATGGTGAATATGTCTCCTTAGGAAAGGTTGAGGCAGCTCTTATTGTCAGCCCCTTTGTAGAAAATATTATGGTGCACGCAGACCCCTTTCATAGTTACTGTGTGGCACTTGTTGTGGCTTCTCAATCTGCATTGGAAGAATGGGCTTCAAGGCAAGGAATTGCTTATTCTGAATTTTCAGAATTGTGCAAGAAAGAAGAAACAGTTAAGGAAGTGTATGCATCACTCGTAAAGGAAGCAAAGAAGGCTCGTTTGGAGAAATTTGAGATCCCTTCAAAAATTAAATTGCTTTCTGACCCTTGGACTCCTGAATCTGGCTTAGTCACAGCAGCTCTCAAGATTAAGAGAGAGGCTATCAGAAAGGCTTTCGCTGAAGAACTCTCGAAGTTATATGCTTCATAA 2088 0.4296 MSAYIVGVLVPLAVTILFRNSKSAKRRGVPVDVGGEPGFAMRNHRFTSPVTTAWEGATTLAELFELACKQHQDRYLLGTRKLISREVEITEDGRSFEKLSLGDYEWLTYGKTFEAVCNFASGLAKIGHVKEERVAIFADTREEWFIALQGCFRRNVTVVTMYSSLGDEALCHSLNETEVTTVICGQKELRKLVHVSGQLDTVKRVICMEDEIPSDTSSIEHGWTITSFADVERLGRENPIDADLPLSADVAVIMYTSGSTGLAKGVMMTHGNVLATVSAVMTIVPDIGRKDIYLAYLPMAHILELAAENLIAAVGSAIGYGSPLTLTDTSSKIKKGTKGDATALMPTLMAAVPAILDRVRDGVQKKVNAKGGLSKKLFDLAYTRRLHAINGSWFGAWGLEKAIWNVLVFKKVRAVLGGRIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFIKLIDWPEGGYLTIDSPMPRGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVENIMVHADPFHSYCVALVVASQSALEEWASRQGIAYSEFSELCKKEETVKEVYASLVKEAKKARLEKFEIPSKIKLLSDPWTPESGLVTAALKIKREAIRKAFAEELSKLYAS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1176 695 Gene3D - 556 689 IPR045851 -
Glsi10g1176 695 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Glsi10g1176 695 SUPERFAMILY Acetyl-CoA synthetase-like 56 693 - -
Glsi10g1176 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 693 - -
Glsi10g1176 695 Pfam AMP-binding enzyme 102 562 IPR000873 -
Glsi10g1176 695 Gene3D - 47 554 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1176 Glsi-ChrGlsi10 7939064 7945928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1176 148 694 Acyl Lipid Metabolism Gene Families AT1G77590 81.353 0.0 947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1176 10 7939064 7945928 Glsi10g1176 10 7939064 7945928 ECH