Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1174 ATGGACGAGTCCGTGCTGCAACTCATCTCCGAAATCGGACTTCGTCTTGGCCAACGAAGTCGTCCCAGCAAGGATTTCATTGTCAAATCCCTGCGAGTAAGCGTTATCTTCCTCCCTCCTTTCCTCCACACTTTACTCACGTTTTCGGAACTATTGCAGATTATATCCACCTACTGCAATGAGCTTGGTTTTGGTTTTAGAACTATACGTGCTGTTCCAAGCAGTCCAGAAAATGCGGGAAGTGAATCGTCGCGGGGAATTGAACATGAATTACTGATTGATTGGATTTTACATTCTAGAAGTACTGCTTTCCATGTCATGTCAGACACTTTGAGACAAGCTGTAAGTGCTTTGACTCAGTTGGAGCAGTTCTCTGTAGTCACTAACGAAGTACAAGCTGACAAAAAGAAAGAAGCTGCCAGAAAGCGAGGAGCTTCGCAAAATCAAGATGCTGCTTTCAAGCCCTTGGAAAATGCGATCATTTGTGGTCTGCTTCAACATGCAGATAAGGATGTTAGACTTCTAGTTGCTATTTGTGTCACTGAAATTTTTAGGGTCAGGGCACCTGAACCACCTTTTGAAGATAAAGATTTGAAGGATGTATTTAAACTTATCATTAGTACATTCGTGGATCTAGCTGATACATCAAGCCCACTTTTTTCAAAAAGGGTTAAAATATTGGACACCGTGGCTCGATTAAAATGCTCTGTGATAATGCTGGATATTGACTCTGAAGATCTTATTCTCGAGATGTTCAATATTTTCTTCTCTGTTGTGAGAGATGACCACCATGCAAATTTGGTTAATGCTATATCTTCTATAATGATAGATATATTAAATGCAGGAGCTTCTCAGCAACTTTTGGAAGTGATTTTACGAAATCTTATAAAGGGAAGAAAGGATGTGACTTGTGCTGCTTCTCAACTAGCTGCATCAGTCATCAATTGTGCAGATGAGACAGAGCTGAAACCCCTTGTTTCTTGGTTTTTAACTTCTTGTATAAATGACAGAGATGCTGTAAGATGTGGGTTGAAAGAATTTTACCATGAAATTATCTTCAAAATTTTCCAGTGTGCTCCTCAGATGCTTCTTGCTGTCATCCCAAGCTTAATTGGTGAATTATTGGCAGATCAGGTTGAAGTTCGAATAAAAGCTGTAAATTTGGTCGGGAAGCTTTTTGCACTTCCTGAACGTCATGCTGCGCAGAAGTATCATGATCTTTTTGTGGAGTTTTTGAAAAGATTTTCTGATAAGTCTGTGGATGTTAGAATTAGTGCCCTGCAATGTGCCAAAGCTATTTATGTGGCAAATCCATCTGGGAGGGAATTTCATGAAATTATCTCTGCCGTTGAAGATCGGTTACTAGACTTTGATGACAGAGTGAGAATGCAGGCGGTTTTTGTTGCCTGTGATCTTTCTAGGTCTAACCTGCAACTAGTTCCATCCAAACTAATATCTCAAATATCTGTTAGAAAGAGGGCCTTGCACAAGCTTATTGAAGTATATCAAGATTACTGCAAGAAATGTTCTGAAGGCAGCATGACAGCCAGTGATCACTTTGAAGAGATTCCATGTAAAATTCTGATGCTTTGCTTTGATAAAGATTGCAAGGAATTCAGGTCACAGAACGTGGAATTGGTTCTTGCTGATGATTTATTTCCAGAGCATCTTTCTGTTGAGGAAAGGACAAAGCACTGGATGCACATGTTTTCTCTTTTCAGTCCTCTTCATGAAAAGGCATTAAATGCTATTTTAACTCAGAAGAGAAGGTTGCAAAATGAGATGAAAAACTATTTAGCTTTGCGGAAGAAATTGAAGGAAAATTGTTCTGAAGATTTACATAAGACGACTGAAAGTATGGTTACAAAAATGGCATCATCCTTTCCAGATCCCCCCAAAGCAGAAGAGTGGCTTGTTAAATTGAACCAATTCAAAGATAATAATGTATTTAACTCACTTGAACAATTGTTGGAGGAGCAGACTTTTACAACTGGACAAATCATCCAAGTATCCTTGTGTTGTATGATCTGTGACTGCATATATGTTGCTTTGAATTTGGGAGACTTGTACATGGATTATCTTTCCAATAACACAATTGGAAACAAGCACTTGGAGGAATCTTCTGTGAAGCTTCTCCTGGCCATTGTTAGAACTTTCCCTGCAATCCTGCATGACTCAGAAAAGAAGTTTCAAATGTTGTTGGAGCAGAAAAGCCCAGTTGATGACAAGCTGATTGAGGTCTTAGCAAAGGCAGGCTCTCACATTTCTGTCAAACTCAGTGATATTTACCCATTTCTTGAGAGAATGTGCTTGGAGGGAACTCGCACACAGGCCAAATTTGCTGTCTCAGCAATTGCTGCCTTAACTTCTGAGCAATCAGTTTTTTCAAATTTATATGAGGGACTGATTGTTTCCTTATATAGCCAGTGTAATGTCGCAACAGTTTTGCAGTCTTTAGGATGCATTGCTCAATACTCTATTTCAACTTTTGAAACTCGAGATGAGGAGATCACGTCATATATATGCCAGAATATTATTCAAGTGGAGCACTTAGATGACTTTCATGATGCAACATCGTCTGATGATACTTCTCAGTGTAGCGATTCCTGCCAATTGAAGATTTATGGTCTAAAAACACTAGTAAAGAGTTATCTGCCATATCAAGGGAACTGTGTGAGACAGAAAATTAATGGTTTGTTGGACATTTTGTTAAGAATGCTGCAGCAGAGTGATCATTTTGTGAATAGAGATTCAAGGGCTCGTATCAGATTAGCTGCTGCAAAGTCAATTCTCCGGCTTTCTAGGAGGTGGGATCTGCATATTACTCAAGAGATTTATCGCTTCACTATTTTGGTTGCAAAGGACTCCTTTTCTTTTGTTAGGAGATCATTTCTAAATAAAATACATAAGATGTTGAAGGAGCGTAAGCTCCCTATTAGATATGCATGCGCTTTTCCATTGGCCGTGACGGATGGTATTGAGGATCTTCAATATCAAAACTCTAAATATATGGCAGAATTTATAAAGGATTACAGTATATTAGCTCGAACAAGGAAAATATCTGCTGTGCAAGGAGCAATTTTCGATTACCCAGCATACATTGTGGTCTTTCTGATTCATGTACTTGCTCATGATACTGGTTTTCCATCTGAAGGCTGTCAAGATGAACAAATGTATACTGACCTCTGTAGTCCAAAAGATGGTGACACATGGAATCTACTCCTTTGCAGTCCACTCTTTTTTGTTGTGCAGACATTAGTCAATTCAAATGTTGTTGATGGTGACCTGGACCTTGTTAATGATGCCGTATTATATCTGTTTAGTATTTTCCGAGCTATCAGAAAAGCTGAGGATGCTGTTGATGTGCAGATGACTACTAAGCTGCACGTGCTGGCTGACATCGGCATATTCTTTTTAAATGTGTTAAAACATGGTGCAATTTCTGCATCACAAGCCCCTGGACAAATTTTGCTGCCTTCATCACTATACAGAATGAGTTTGTCTAAGAATAATGCTAATTTAAAAAAGTCGTATTTTGATGAATGCTTTCTGAGTAGAGTTTTGCAAAAGCTTAAGTCTATTGTCCCTCAGGCACATGTTCCAAAGCCTGCTAAAACTCTTCTTAGATATGTTCGGAAGTGTCAAGAGGATGTTCCGAAGTCCAATGTTAATGCTTACATTGTATCAAACTTGGCATCTAGCAAACCAGATGATTTGTCAAGGAGGGAAACAACAAATGCGAAAACTGTAGGACCTGATATTCCTTCAGGGCAAAGGAGAAAACGTGCTGTGTCTTCGACTGTTTCTGGATCAGTTGGTTTGCATGAATGCTCCACTATTGATAAGAAACTGAATATTGAATCTAAAAATTGTGAAAGAACTCTGGAGAGAAACCAAGTATCATCTTGTGGTTCTGTGAGCTTGAAGGGTTCTCTAGTTGGATCACATGTTTCAACCTCTAAATCAAAAAGAACTGCTGCTTCTTTGATGGAAAATGCTGTGACAAGCAGCAAATATACTGTTCAACCTCTCAAGTGCCCCAGAACCAACATCAAAGATACTTGTGGCTCAAAGAAGGAAGGTATACTGGCAGACCAGTCCAATAAAAGTCACTTCTGGAATCGTGATCCTGATAAACATTCTTACCTTAGTAGTCTAAAGAAAACTACTGCTACAGAAGGAGGCCGGGCAACCAAAAAGGGATCATCTCTTAACCAAGAAAATGCAAACGTTAATGGAAGGGGAAACTCTACAGGGACTTCAGCATCGGAAGTTGTTAATACTAATGCTCTGAGTCCTACCTTGGCTGACTCCTCTGCTTCTGTGGACTTTCTCGAAAGATCTCAACGGGAGAGAGCTCTTTGCTCTTAA 4371 0.394 MDESVLQLISEIGLRLGQRSRPSKDFIVKSLRVSVIFLPPFLHTLLTFSELLQIISTYCNELGFGFRTIRAVPSSPENAGSESSRGIEHELLIDWILHSRSTAFHVMSDTLRQAVSALTQLEQFSVVTNEVQADKKKEAARKRGASQNQDAAFKPLENAIICGLLQHADKDVRLLVAICVTEIFRVRAPEPPFEDKDLKDVFKLIISTFVDLADTSSPLFSKRVKILDTVARLKCSVIMLDIDSEDLILEMFNIFFSVVRDDHHANLVNAISSIMIDILNAGASQQLLEVILRNLIKGRKDVTCAASQLAASVINCADETELKPLVSWFLTSCINDRDAVRCGLKEFYHEIIFKIFQCAPQMLLAVIPSLIGELLADQVEVRIKAVNLVGKLFALPERHAAQKYHDLFVEFLKRFSDKSVDVRISALQCAKAIYVANPSGREFHEIISAVEDRLLDFDDRVRMQAVFVACDLSRSNLQLVPSKLISQISVRKRALHKLIEVYQDYCKKCSEGSMTASDHFEEIPCKILMLCFDKDCKEFRSQNVELVLADDLFPEHLSVEERTKHWMHMFSLFSPLHEKALNAILTQKRRLQNEMKNYLALRKKLKENCSEDLHKTTESMVTKMASSFPDPPKAEEWLVKLNQFKDNNVFNSLEQLLEEQTFTTGQIIQVSLCCMICDCIYVALNLGDLYMDYLSNNTIGNKHLEESSVKLLLAIVRTFPAILHDSEKKFQMLLEQKSPVDDKLIEVLAKAGSHISVKLSDIYPFLERMCLEGTRTQAKFAVSAIAALTSEQSVFSNLYEGLIVSLYSQCNVATVLQSLGCIAQYSISTFETRDEEITSYICQNIIQVEHLDDFHDATSSDDTSQCSDSCQLKIYGLKTLVKSYLPYQGNCVRQKINGLLDILLRMLQQSDHFVNRDSRARIRLAAAKSILRLSRRWDLHITQEIYRFTILVAKDSFSFVRRSFLNKIHKMLKERKLPIRYACAFPLAVTDGIEDLQYQNSKYMAEFIKDYSILARTRKISAVQGAIFDYPAYIVVFLIHVLAHDTGFPSEGCQDEQMYTDLCSPKDGDTWNLLLCSPLFFVVQTLVNSNVVDGDLDLVNDAVLYLFSIFRAIRKAEDAVDVQMTTKLHVLADIGIFFLNVLKHGAISASQAPGQILLPSSLYRMSLSKNNANLKKSYFDECFLSRVLQKLKSIVPQAHVPKPAKTLLRYVRKCQEDVPKSNVNAYIVSNLASSKPDDLSRRETTNAKTVGPDIPSGQRRKRAVSSTVSGSVGLHECSTIDKKLNIESKNCERTLERNQVSSCGSVSLKGSLVGSHVSTSKSKRTAASLMENAVTSSKYTVQPLKCPRTNIKDTCGSKKEGILADQSNKSHFWNRDPDKHSYLSSLKKTTATEGGRATKKGSSLNQENANVNGRGNSTGTSASEVVNTNALSPTLADSSASVDFLERSQRERALCS 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1174 1456 Coils Coil 581 608 - -
Glsi10g1174 1456 Gene3D - 106 535 IPR011989 -
Glsi10g1174 1456 CDD PDS5 111 720 - -
Glsi10g1174 1456 MobiDBLite consensus disorder prediction 1235 1265 - -
Glsi10g1174 1456 MobiDBLite consensus disorder prediction 1388 1422 - -
Glsi10g1174 1456 Pfam Sister chromatid cohesion protein PDS5 protein 124 1164 - -
Glsi10g1174 1456 SUPERFAMILY ARM repeat 161 972 IPR016024 -
Glsi10g1174 1456 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 113 1379 IPR039776 GO:0007064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1174 Glsi-ChrGlsi10 7907464 7927559 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1174 10 7907464 7927559 Glsi10g1174 10 7907464 7927559 ECH