Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1160 ATGTTCATAACATTGTCTGCCAAAGCACGCCGCGAGCTGAGTTCACTTCCCTTCTCCATGGCCATACCTTTCTGCTCCTATTTCTTACTGATTTATCTTACTCTCTTCCTCTCAATATCCCATCTTCTCTCTGCAGCTTCACCACCCTCCCCCCCATCCTTTGACCGCCAACAGGAAGACACGCCCATCACTCGCTTCCAGAGCTACCTCAGAATCAAGACGGCCCACCCAGAACCTGATTATTCTTCAGCTGTCTCCTTCCTCAAATCGTATGCACACTCCATTGGCATCCAACATCGAATTCTAGAATTCTCACCGGGAAAGCCCCTCCTCCTCCTCACATGGCCTGGCTCGGAGCCTTCTCTCCCTTCTCTTCTCTTCAATTCCCACATCGACTCCGTCCCCGCCGAGCCCTCCAAGTGGCTCCACCCGCCTTTCTCTGCCGTCCGGACCCCCGACGGCAAAATCTTTGCCCGTGGAGCCCAGGACGACAAATGCATCGGCATGCAATACTTAGAGGCTTTTCGGAATCTAAAAGAGAAAAATTTCACGCCTACCCGCACCATCCACGTCTCCTATGTGCCGGATGAGGAGATTGGTGGGTTCGATGGGGCTGCCAAGTTTGTGGCTTCAAAGGAGTTTGAGGATTTGAATGTTGGGTTTATGTTGGATGAAGGACAGGCCTCACCTGGTGATGAGTTTAGAGTTTTCTATGCGGATAGGTCTCCATGGGAAGTCAAAATTAAGGCAAAAGGACAACCTGGACATGGCTCGAGGATGTATGATAACAGTGCAATGGAGAATTTGATGAAGAGCTGTGAGGTTGTGAGCAGGTTTAGGGAGAGTCAATTTGATGTGGTCAAGTTTGGTAAAGTTCCTAATTCTGAAGTTATTTCAGTTAATCCCGTTTATGTTAAAGCTGGGGTTCCTTCACCAACTGGATTTGTAATGAATGTGCAACCTTCGGAGGCTGAAGCAGGTTTCGATCTTAGGCTGGCCCCGACAGCGGATCCAGAAGAAATGAGAAGAAGAATTGCTGAAGAATGGGCACCAGCCGTTAGAAATATGTCATATGAGATAAACGAGAAAGGACCGCTTAGAGACAATATGGGGCTCCCTATGATGACCCCAACGGATGATTCGAATCCATGGTGGTTAGTTTTCGAGAAGGCTGTCACATCAGCTGGAGGAAAACTTGCAAAACCTGAAATTCTTGCTTCAACTACTGATTCTCGATTCGTTAGACAGAAAGGAATTCCCGTACTTGGATTCTCACCAATGACAAATACTCCCATCTTGCTTCACGACCGCAATGAGCACCTACAAGATACTGTGTATATGAAGGGAATACAGATATACGAATCTGTGGTAAGTTCCTTGAGTTCATTTACAAATTAG 1398 0.475 MFITLSAKARRELSSLPFSMAIPFCSYFLLIYLTLFLSISHLLSAASPPSPPSFDRQQEDTPITRFQSYLRIKTAHPEPDYSSAVSFLKSYAHSIGIQHRILEFSPGKPLLLLTWPGSEPSLPSLLFNSHIDSVPAEPSKWLHPPFSAVRTPDGKIFARGAQDDKCIGMQYLEAFRNLKEKNFTPTRTIHVSYVPDEEIGGFDGAAKFVASKEFEDLNVGFMLDEGQASPGDEFRVFYADRSPWEVKIKAKGQPGHGSRMYDNSAMENLMKSCEVVSRFRESQFDVVKFGKVPNSEVISVNPVYVKAGVPSPTGFVMNVQPSEAEAGFDLRLAPTADPEEMRRRIAEEWAPAVRNMSYEINEKGPLRDNMGLPMMTPTDDSNPWWLVFEKAVTSAGGKLAKPEILASTTDSRFVRQKGIPVLGFSPMTNTPILLHDRNEHLQDTVYMKGIQIYESVVSSLSSFTN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1160 465 Pfam Peptidase dimerisation domain 241 348 IPR011650 -
Glsi10g1160 465 Gene3D - 245 357 - -
Glsi10g1160 465 FunFam Aminoacylase 1 54 245 - -
Glsi10g1160 465 SUPERFAMILY Bacterial exopeptidase dimerisation domain 244 360 IPR036264 -
Glsi10g1160 465 PIRSF ACY-1 53 465 - -
Glsi10g1160 465 Pfam Peptidase family M20/M25/M40 126 457 IPR002933 GO:0016787
Glsi10g1160 465 FunFam Aminoacylase-1, putative 382 463 - -
Glsi10g1160 465 CDD M20_AcylaseI_like 59 461 - -
Glsi10g1160 465 Gene3D Zn peptidases 53 244 - -
Glsi10g1160 465 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 57 463 IPR010159 GO:0004046|GO:0005737|GO:0006520
Glsi10g1160 465 PANTHER AMINOACYLASE-1 55 464 - -
Glsi10g1160 465 Gene3D - 382 463 - -
Glsi10g1160 465 FunFam aminoacylase-1 isoform X1 245 356 - -
Glsi10g1160 465 SUPERFAMILY Zn-dependent exopeptidases 57 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1160 Glsi-ChrGlsi10 7809915 7817421 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1160 10 7809915 7817421 Glsi10g1160 10 7809915 7817421 ECH