Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1151 ATGAGGGCCGCCGTTGAACCATCCACGGTGGAGAAGTTTGATGATGGGGAAAAGGAGAAGAAGAAGAAACGACGACCCAATCGTCGATCCAAACAAACTTCTGCTTCCTCAGCAGTCTCAAATTTGAGTGAACATAAATTTGTAAATTCAGGCAATGCAAAATGCCCCATCGTGGTAAATGAGAAACATGGGGTGTCACCAGAGTGCTCGGGAAACGTCAGGACACCTACTCATGTGACTGCTTCCTCATGCAACTCTTCATTGAAGCAGCTGGAGGTCCACATTTGTTCCCGTGATGAGCAAGGGCTGTCCAGAGCATCAAATGTAGCTTTCACTTCAATGCCACCGATGCATATCAGTGAGCATCAAATGGAACCTGTAGATTTGCAAGATATGCAACTGCATGGTGGAGGAGTGTTTTCAAAATCATGTTCTGACCCTGTTGGCTCCTCAGGAGCTTGTTCAAGTAAAGATCTGTTTTCTTCCAGTCAGATGGGGGTTTGTGTGCAGAGAAATTATTTTAGTCCACATTGGTCTATGGAGGCTGTAGAGAAGGCGTTAGAGAAGGGTGATGTTTTTAAAGCTCTGTTTCACGTCAATGCTCACAACAGACTTGAGGCCTATTGTAAAATTGATGGAATGCCAACAGATGTCCTAATTAGTGGAATTCCTGCCCAGAATAGAGCTGGTGGAAGGAAACCCTTTGAGCTGCCTGCCAATTATAAATATCTTTTTGGGGTTGTGGTCGATGGCGACATTGTTGCAGTTAAGATTGATCCTTTGTCGTTGTGGCCTAAAATGAAAGGATCAAATGGTACTGTTAATAATACTGCACCACTAGAAGATTGTAACCTGCTTGCAGAGGAGAATGAAGTGGCTGGTAATATATCTATAGGAAAAGGTAAGGTAGACACTGATCATGAGTCTGCTAATTACAGAAGCTGCCCTGGTCAAAACAAGAAGGATACAGATCACAATCCGACTCCTTACAGAAATTGTCCTTTTCCTGAAAAAAGTTTCTTTAACAAGGATTATGCTTTTGAGGGTTCAACTCCCCATTTAGATCCACTTAGACCAGCTAGTCATGATGGTCTTGATCCTGCTTCTGATCCCTTAAATATCAGTTCTTGCAGTGGACGGGGTGAAGTTATTAATGCAGTGGAAAACATGTGTTCATTGGTTAGTTCTTTCCCTTCTAAAAGACCAACTGGCAGAGTAGTTGCTGTTATTGAGAGATCTCCACGTCGAGAGACTATCGTTGGTCATCTTAATGTTAAGCAGTGGGTTTCTTTTAGGGACATAAGCAGAAAAGATGCAAAGAAGAGTAAAAAATTGGCTTCTGAGTGTGAGTACATTCAGCTTACACCAACTGATCCGAAGTTACCAAAAATGATGCTTCTTGTTAGAGATTTGCCTAACTGCATAAAGAAAAAGCTGCAAAGCGGAAATGGGACAATTGAAAAGGATTTGGTAGCTGCACGAATTGATAACTGGGTTGAAGAAAGTCCTTGTCCACAAGCTCACATCTTGCATATTTTTGGACGAGGTGGTGAAATTCAGCCACAATTAGATGCAATTTTGTTTCAGAATGCAATCTGTGTGTCTGAATTTTCACCTGAAGCTCTAAGCTGCCTTCCATGTGTTTCTTGGGAGGTGCCTCAGAAAGAATTTCAAAATAGAATGGACCTTAGAAATTTGTGCATATTTACGATTGATCCGTCAACTGCCACTGATCTAGATGATGCACTGTCTATTCAGAAGTTATCTAATGGAAATTTTAGAGTAGGTGTCCACATTGCTGACGTGTCATACTTTGTTTTACCTAACACGGCCTTAGATAGTGAGGCTCAGTCTAGGTCAACAAGTGTCTACATGTTGCAAAAAAAGATACCAATGTTGCCAGCATTGTTTTCAGAGAATATAGGTTCACTTAATCCTGGAGTGGATCGACTTGCGGTTTCCATGCTTTTGGACATTAACCTTGCTGGGGATGTTGTAGATCAATGGATTGGTCGTACTGTGATACAATCTTGTTGTAAGCTTTCATATGAACTTGCACAGGATATTATTGATGGGGTTATTGATGTTGAAAGTTCAAACACAATAGGAGATAACTATCCTAAGGTGCATGGCCATTTTGGATGGCCTGATGTTGTTACATCTGTGAAGAGTCTTTATGAAATCTCAAAATTTTTGAAAGATAAGAGATTTAATGATGGGGCTCTATGGCTTGAAAGCCCCAAAGTTGTCTTCTTGTTTGATGAATTTGGAATTCCTTATAATAGTATGCTCTCTGAACGGAAAGAATCAAATTTCCTTGTCGAAGAATTTATGCTTTTGGCTAATAGAACAGCTGCTGAAGTCATATGTAGGGCATATCCTGATGGTGCATTATTGCGGAGGCATCCCGAACCTAATTTGCGAAAACTCAGAGAGTTTGAGGCATTCTGTCATAAACATGGTTTAGAGCTGGACACTTCCTCATCTGGTCGGTTCCATTGGTCTTTAGAGCAGATCAGGGAACAGATCAAGGGTGACCCTACTCTTTGTGATATTCTTATTTCCTATGCTACAAGGCCAATGCAGTTGGCATCTTATTTCTGTAGTGGAGATTTGAAGGACAATGAAAAGGGTTGCAGTCATTATGCATTGGCTGTCTCATTTTACACTCATTTTACTTCTCCTCTCCGTCGGTATCCTGATATTGTTGTTCACCGGACACTCCTTGCTGTTATAGAGGCAGAGGAAATGTATCTGAAGCAGCAAAAGACACTGCTGGTTAATAAGGGTGAGGAAGTGCAAAAGAGATGTTTCACTGGTGTGAACTTTGGTAAAGAAGCTGCAGAATCCGAGGAAGGTAAAGAAGCGCTATCAGCTACAGCTTTGAAGCATGGAGTTCCGTGCACTGAATTACTTGCAGATGTTGCTGCTTATTGCAATGAGAGAAGGCTAGCTAGTAGAAATGTTAAGGATGGCTGTGATAAACTCTATATGTGGGTTCTCCTCAAGAAAGAGGTGCTATTATCGGAAGCAAGGATATTGGGACTTGGCCCAAGGTTCATGTCAATTTACATTCAAAAGCTAGCTATTGAGCGGCGCATATATTATGATGAAGTTGAAGGCTTGGCTGTGGAATGGCTTGATGCAACATCCGCATTGGTGCTTAGCATGTATCCTAATAAACGTGCATTTAGGAGAGGTAGCCCTGGTAAATGGAGGGCATTTGAAGAAGTTGTGTTGCTCTCTTGTCCATATGACCTGAAATTTGGCTTAGATGGTTCCAAGGAGCGTGATGCAGTGAACGTGGGAGATGGTATAGCTGCTATGGACAGGGATAGATCAGAGTGTTCAGGGACTGAAATTGACCCTGCAGTTTTCCCTATCACTCTGCGTCTTCTTTCAACAGTTCCAGTAGCACTGCATGCTGTTGGCGGTGATGATGGACCACTTGATATTGGGGTGAGGCTGTACATGACCTCCTATTTGAGGTAA 3492 0.4204 MRAAVEPSTVEKFDDGEKEKKKKRRPNRRSKQTSASSAVSNLSEHKFVNSGNAKCPIVVNEKHGVSPECSGNVRTPTHVTASSCNSSLKQLEVHICSRDEQGLSRASNVAFTSMPPMHISEHQMEPVDLQDMQLHGGGVFSKSCSDPVGSSGACSSKDLFSSSQMGVCVQRNYFSPHWSMEAVEKALEKGDVFKALFHVNAHNRLEAYCKIDGMPTDVLISGIPAQNRAGGRKPFELPANYKYLFGVVVDGDIVAVKIDPLSLWPKMKGSNGTVNNTAPLEDCNLLAEENEVAGNISIGKGKVDTDHESANYRSCPGQNKKDTDHNPTPYRNCPFPEKSFFNKDYAFEGSTPHLDPLRPASHDGLDPASDPLNISSCSGRGEVINAVENMCSLVSSFPSKRPTGRVVAVIERSPRRETIVGHLNVKQWVSFRDISRKDAKKSKKLASECEYIQLTPTDPKLPKMMLLVRDLPNCIKKKLQSGNGTIEKDLVAARIDNWVEESPCPQAHILHIFGRGGEIQPQLDAILFQNAICVSEFSPEALSCLPCVSWEVPQKEFQNRMDLRNLCIFTIDPSTATDLDDALSIQKLSNGNFRVGVHIADVSYFVLPNTALDSEAQSRSTSVYMLQKKIPMLPALFSENIGSLNPGVDRLAVSMLLDINLAGDVVDQWIGRTVIQSCCKLSYELAQDIIDGVIDVESSNTIGDNYPKVHGHFGWPDVVTSVKSLYEISKFLKDKRFNDGALWLESPKVVFLFDEFGIPYNSMLSERKESNFLVEEFMLLANRTAAEVICRAYPDGALLRRHPEPNLRKLREFEAFCHKHGLELDTSSSGRFHWSLEQIREQIKGDPTLCDILISYATRPMQLASYFCSGDLKDNEKGCSHYALAVSFYTHFTSPLRRYPDIVVHRTLLAVIEAEEMYLKQQKTLLVNKGEEVQKRCFTGVNFGKEAAESEEGKEALSATALKHGVPCTELLADVAAYCNERRLASRNVKDGCDKLYMWVLLKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEGLAVEWLDATSALVLSMYPNKRAFRRGSPGKWRAFEEVVLLSCPYDLKFGLDGSKERDAVNVGDGIAAMDRDRSECSGTEIDPAVFPITLRLLSTVPVALHAVGGDDGPLDIGVRLYMTSYLR 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1151 1163 Gene3D - 168 230 - -
Glsi10g1151 1163 Pfam RNB domain 560 912 IPR001900 GO:0003723|GO:0004540
Glsi10g1151 1163 SUPERFAMILY Nucleic acid-binding proteins 172 412 IPR012340 -
Glsi10g1151 1163 SUPERFAMILY Nucleic acid-binding proteins 403 532 IPR012340 -
Glsi10g1151 1163 PANTHER RIBONUCLEASE 20 1159 - -
Glsi10g1151 1163 MobiDBLite consensus disorder prediction 306 328 - -
Glsi10g1151 1163 MobiDBLite consensus disorder prediction 7 21 - -
Glsi10g1151 1163 Gene3D - 434 518 - -
Glsi10g1151 1163 Hamap DIS3-like exonuclease 2 [DIS3L2]. 18 1138 IPR028591 GO:0000175|GO:0034427
Glsi10g1151 1163 MobiDBLite consensus disorder prediction 31 45 - -
Glsi10g1151 1163 ProSitePatterns Ribonuclease II family signature. 881 905 IPR022966 -
Glsi10g1151 1163 MobiDBLite consensus disorder prediction 1 45 - -
Glsi10g1151 1163 SUPERFAMILY Nucleic acid-binding proteins 522 1004 IPR012340 -
Glsi10g1151 1163 Pfam Dis3-like cold-shock domain 2 (CSD2) 451 530 IPR041505 -
Glsi10g1151 1163 SMART RNB_2 560 914 IPR001900 GO:0003723|GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1151 Glsi-ChrGlsi10 7736598 7743081 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1151 10 7736598 7743081 Glsi10g1151 10 7736598 7743081 ECH