Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1136 ATGCCTGTGCCTCCTCCTCTTCCCGCTGCCGCCATCAATACCGTTAGATCCGATTCGATTTCCCGCCCCACCAACCACAGTCTTAGCAATAACAATAACAGCGAGTACGGACGGCTGAGTCAGCGGGAGCAGCAACAGCCGGTGGTGGACGTGAAGATTAACGACTTGGTTGGGAACGGAATATCGGGGATACTCTATAAGTGGGTCAACTACGGCAAAGGCTGGAGGCCTCGATGGTTCGTCCTTCAAGATGGCGTCGTGTCTTACTATAAGATTCACGGGCCCGATAAGATCATCGTCAATCCCGAAACCGAGAAGAGGTCCAAGGTTATCGGCGAAGAATCCATGCGAATGATCTCTCGGAACCAGAATGCCCATTCCTATAACCAGCACTTCCACCATCTACGAAAACCCTTTGGAGAAATCCATCTCAAGGTTTCAACTATTCGTGAAAGCAAATCCGATGATAAGCGCTTTTCCATTTTCACTGGGACGAAAAGAGTCCACTTGAGGGCCGAGACACGTGACGATCGAGTGGCATGGATGGAGGCTCTGCAGGCAGTAAAAGATATGTTCCCCCGGATGTCCAACAGTGAGCTGATGGCTCAGTTAGACAATGTAACCATTTCAACGGAAAAACTTAGACAGAGACTACTGGAAGAACGTGTTAGTGAGGCAGCCATTCTGGACAGCGAGCAAATTATGAGAAACGAGTTTGCAGCACTGCAAAATAAGCTTATGCTGCTTAAGGAGAAGCAGTGGCTTCTGATCGACACATTGCGACAATTAGAGACAGAAAAGGTTGATTTGGAGAATACAGTTGTAGATGAGAGCCAAAAACAGTTGAATGATCAAGAGGAATGCTCTTGGTTAAAGGAGGAAAAATTTAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAATGAGAGAAATGATGCTGCAGAAGAAGAAACAGATGATGATGACAATGCCTTTTTTGACACTCGTGACTTTCTATCATCCAGTTCTTTTAAAAGTAATGGGTCTGATTATAGGGTATCATCTTTCTCTTCAGGGGATGAAGGGCTCTATGCAGTTGAATCAGAGGATGATGTAGATCCTTTGATTAGATCTGTTGCAACTAACTATCCTTATATTAAGCGGCGTAAGAAATTGCCTGACCCTATGGAAATAGAGAAAGGTGTCAGTCTCTGGTCAATGATTAAGGATAATATCGGGAAGGATTTAACAAAAGTATGCCTGCCTGTTTACTTTAATGAGCCTCTATCTTCTCTGCAAAAATGTTTTGAAGAAATGGAGTATTCATATCTCCTGGATCGTGCATACGAATGCGGAAGAAGGGGAAATAGCCTCTTGAGGATTCTGAATGTGGCTGCTTTTGCTGTATCTGGCTACGCTTCAACGGAAGGGAGAATTTGCAAACCATTTAATCCATTGTTAGGGGAAACATATGAGGCCAATTATCCAGATAAAGGTCTACGATTTTTCTCGGAGAAGGTCAGTCATCACCCAATGATAGTCGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCAGTCGGTATTTTGACTTTGCAATTTGATGATGGGGAAGTTTTCCAGTGGAGTAAGGTTACAACATCAATATACAATCTCATATTGGGAAAGTTGTACTGTGATCACTATGGTACAATGCGTATACAGGGAAACCAAGAATACTCGTGTAAACTGAAATTCAAAGAACAATCTATAATTGATCGAAATCCTCACCAGGTACACGGTACCATTCAAGATAGGAATGGGAAGACAGTGGCAACTCTATTTGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGATTTTGCTGGGAAGGGGAAAGGTTATGACTCTTTATCAGAAGCCCATCTACTCTGGAAGCGTAGCAAGCCGCCCAAGTACCCCACTAGATATAACTTTACTCGCTTCGCCATCACATTAAACGAACTTATCCCTGGTTTGAAGGAAAAGTTGCCACCTACAGATTCCAGGCTAAGACCAGACCAAAGGTATCTGGAAAACGGGGAGTATGAGATGGCAAATTTGGAGAAATTGCGGCTAGAGCAGCGTCAACGCCAGGCTCGAAAGATGCAAGAAAGGGGTTGGAAACCACGATGGTTCGCCACGGATAAAGCAAACGGTACATACCGCTATTTGGGAGGGTATTGGGAGGCCAGGGAACGAGGAGACTGGGACTCCTGCCCTGACATCTTTGGCCAAATCCCTGCCGATCATCTTTCTGATTGA 2319 0.4459 MPVPPPLPAAAINTVRSDSISRPTNHSLSNNNNSEYGRLSQREQQQPVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVVSYYKIHGPDKIIVNPETEKRSKVIGEESMRMISRNQNAHSYNQHFHHLRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRVHLRAETRDDRVAWMEALQAVKDMFPRMSNSELMAQLDNVTISTEKLRQRLLEERVSEAAILDSEQIMRNEFAALQNKLMLLKEKQWLLIDTLRQLETEKVDLENTVVDESQKQLNDQEECSWLKEEKFSEGSASESEDDNERNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSGDEGLYAVESEDDVDPLIRSVATNYPYIKRRKKLPDPMEIEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYECGRRGNSLLRILNVAAFAVSGYASTEGRICKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLQFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGTIQDRNGKTVATLFGKWDESMHYVNGDFAGKGKGYDSLSEAHLLWKRSKPPKYPTRYNFTRFAITLNELIPGLKEKLPPTDSRLRPDQRYLENGEYEMANLEKLRLEQRQRQARKMQERGWKPRWFATDKANGTYRYLGGYWEARERGDWDSCPDIFGQIPADHLSD 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1136 772 SUPERFAMILY Oxysterol-binding protein-like 393 766 IPR037239 -
Glsi10g1136 772 Coils Coil 704 724 - -
Glsi10g1136 772 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 60 750 IPR000648 GO:0008289
Glsi10g1136 772 MobiDBLite consensus disorder prediction 281 307 - -
Glsi10g1136 772 FunFam oxysterol-binding protein-related protein 1D isoform X1 482 654 - -
Glsi10g1136 772 SUPERFAMILY PH domain-like 61 197 - -
Glsi10g1136 772 Pfam Oxysterol-binding protein 396 751 IPR000648 GO:0008289
Glsi10g1136 772 MobiDBLite consensus disorder prediction 308 324 - -
Glsi10g1136 772 FunFam Oxysterol-binding protein-related protein 2A 693 764 - -
Glsi10g1136 772 Pfam Pleckstrin homology domain 66 186 - -
Glsi10g1136 772 Coils Coil 260 280 - -
Glsi10g1136 772 ProSiteProfiles PH domain profile. 58 190 IPR001849 -
Glsi10g1136 772 MobiDBLite consensus disorder prediction 281 325 - -
Glsi10g1136 772 Gene3D - 693 752 - -
Glsi10g1136 772 Coils Coil 232 252 - -
Glsi10g1136 772 SMART PH_update 59 192 IPR001849 -
Glsi10g1136 772 CDD PH_ORP_plant 61 197 - -
Glsi10g1136 772 MobiDBLite consensus disorder prediction 14 44 - -
Glsi10g1136 772 Gene3D - 59 192 IPR011993 -
Glsi10g1136 772 Gene3D - 482 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1136 Glsi-ChrGlsi10 7634820 7641268 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1136 10 7634820 7641268 Glsi10g1136 10 7634820 7641268 ECH