Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1057 ATGTCCCGGCCCCTGCACCGAGGCGTATCTGGGTTTCGGATCCCTGACAACAATCGTAAGCTGTGGGACTCTCAATCCAAAGATAAAACAGAGAAGGAAGATTTGGATAGAAGGGGTTCTTCAGATCACAGCCCTTTGGGCCTGAAATTTCCTTTGCGGTTGCTTTTTGCTGATAATTCTCATTCTAAATATGGTATCACTGAGAATGGTTTTAAATCTGATCCCTTCCTTGTTGGCACTCCCAGAAATCGGCATAAGCTCGCAATGATTTTCTTGAAGTTTAGTTTAGTATTTATAGTTATTCTTGCTCTGACTGGATCCTTTTGGTGGGCTATCTCGATTTCACCCTCCTCAAGAGGCAACATTTCCCATGGTTATAGAAGACTCCAAGAAAAACTTGTATCTGACCTGCTGGATATTGGGGAGTTTTCTCGTGGTCCCTCAAGGTTGAAAGAATTGGAATTTTGTTCTGAGGAGTTTGAAAACTACGTTCCTTGCTTTAACGTTTCTGAGAATCTAGCTTTGGGTTATTCTGATGGTAGTGAGTTTGACCGGCAATGTGGCAACGAGCTCAGGCAAAATTGTTTAGTTCTCTCACCAGCTAATTACAGAATTCCTCTTCGGTGGCCTACTGGAAGAGATGTTATCTGGATTGCCAATGTTAAAATCACAGCACAGGAGGTTCTTTCTTCGGGAAGCTTAACCAAGAGGATGATGATGCTGGATGAAGAGCAGATTTCCTTTCGTTCAGCCTCTCTTATGTTTGATGGTGTCGAAGACTACTCACATCAAATTGCAGAAATGATTGGACTCAGAAATGAATCTAACTTCATACAAGCTGGGGTTAGAACCATACTGGACATAGGTTGTGGCTATGGTAGCTTTGGTGCCCACCTCTATCACAGTCAGCTCCTAACTATGTGCATTGCAAACTATGAGCCTTCAGGAAGCCAAGTTCAGCTCACACTTGAGAGAGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAAAACAATTGCCATATCCATCTCTTTCCTTTGATATGTTGCATTGTGCAAGATGTGGCATTGACTGGGACCAGAAAGATGGCATTCTCTTGATTGAAGCTGATAGACTTCTAAAACCGGGTGCCTACTTTGTTTGGACATCACCGCTTACAAATGCTCGAAACAAAGAGAATCAGAAAAGATGGCGGTTTGTTCAGGATTTTACTGAAAATCTTTGCTGGGAAATGTTGTCACAGCAAGATGAAACTGTGGTATGGAAGAAAACTAGTAAAAGGAATTGCTATAATTCAAGAAAGCCTGGTTCTGGCCCTTCTTTGTGTATTAAAAATCATGATGTTGAGTCTCCATATTATCGAGAACTGCAAAACTGCATAGGAGGAACACAGAGCAACCGTTGGATTTCTATTGAAGAGAGGGAAACATGGCCTTCTCGGGCTAACTTGAACAAGAAAGAGCTTGCAATCTATGGGTTGCAGTCTGAAGAATTTGTTGAGGATTCCGAGAAGTGGAGAACAGCAGTCCATAATTATTGGTCTCTTCTGTCACCTTTAATATTCTCTGATCATCCGAAAAGGCCTGGTGAAGAGGATCCTCCACCACCTTACAACATGCTAAGAAATGTGCTAGACATGAATGCTCGTCTTGGTGGTTTTAATTCTGCATTGTTGCAGGCTGGAAAGTCTGTATGGGTGATGAATGTTGTGCCAACTAGTGGACCTAACTACCTTCCCTTGATCAAGGACAGGGGGTTTGTCGGTGTTTTGCATGATTGGTGTGAGGCCTTTCCGACATATCCTAGAACCTATGACTTGGTTCATGCAGCAGGACTTCTATCCCTTGCAACTGCTCAGCAGCGTAGATGCACTGTGCTTGATTTGTTCACTGAGATTGATAGATTACTTCGCCCAGAGGGTTGGATTATAATTCGTGATACAGTTCCTTTGATAGAATCAGGCAGAACTCTTGCAGCACGGCTGAAGTGGGATGCACGAGTTGTAGAAATTGAGAGTGACAGCGATCAAAGACTCCTGGTCTGTCAGAAACCGTTTTTTAAAAAACAGGCAAACTAA 2076 0.4287 MSRPLHRGVSGFRIPDNNRKLWDSQSKDKTEKEDLDRRGSSDHSPLGLKFPLRLLFADNSHSKYGITENGFKSDPFLVGTPRNRHKLAMIFLKFSLVFIVILALTGSFWWAISISPSSRGNISHGYRRLQEKLVSDLLDIGEFSRGPSRLKELEFCSEEFENYVPCFNVSENLALGYSDGSEFDRQCGNELRQNCLVLSPANYRIPLRWPTGRDVIWIANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSFGAHLYHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCARCGIDWDQKDGILLIEADRLLKPGAYFVWTSPLTNARNKENQKRWRFVQDFTENLCWEMLSQQDETVVWKKTSKRNCYNSRKPGSGPSLCIKNHDVESPYYRELQNCIGGTQSNRWISIEERETWPSRANLNKKELAIYGLQSEEFVEDSEKWRTAVHNYWSLLSPLIFSDHPKRPGEEDPPPPYNMLRNVLDMNARLGGFNSALLQAGKSVWVMNVVPTSGPNYLPLIKDRGFVGVLHDWCEAFPTYPRTYDLVHAAGLLSLATAQQRRCTVLDLFTEIDRLLRPEGWIIIRDTVPLIESGRTLAARLKWDARVVEIESDSDQRLLVCQKPFFKKQAN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1057 691 FunFam probable pectin methyltransferase QUA2 244 424 - -
Glsi10g1057 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 280 423 IPR029063 -
Glsi10g1057 691 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 82 686 IPR004159 GO:0008168
Glsi10g1057 691 MobiDBLite consensus disorder prediction 1 43 - -
Glsi10g1057 691 MobiDBLite consensus disorder prediction 20 43 - -
Glsi10g1057 691 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 162 683 IPR004159 GO:0008168
Glsi10g1057 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 541 664 IPR029063 -
Glsi10g1057 691 Gene3D Vaccinia Virus protein VP39 255 434 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1057 Glsi-ChrGlsi10 7034050 7039609 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1057 10 7034050 7039609 Glsi10g1057 10 7034050 7039609 ECH