Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1038 ATGCTCGTCAAGTGGCTGCAGCTGGACACACAGCTACTGGATGCCTGTTCCCACGAGAAAAGAAGAGTAGCAGTTGGCCAGAAACCAAGGGACCCAACATCCCAACTAATCCCCAACTTTATCTTGTACAGAAATAGAATGAGAGGTTTTGGTGAGTTGGGTTTACATGCCTATGACATTATATGGGTTCATGGCCAACGGCCTGTGTATGTCATTGCGTTAGGTAGGCAGTTACTATCAAAGATTTCTGATTTATATAAGCAAACCCATTCTTCCACACTTTCTCAGAGCCTCCTCTGTTTCCTTCTTCCCCATACAATGGCCTTCTCCAACGCCTTTATTTTAAGTCTATTTGTAGCAATTAACATGGCCCTGCCAGCCCTTTCAACAGTCTACACCGTTGGAGATACCTCAGGTTGGACAATGGGTGCTGATTATGGGACCTGGGCTACTGACAAGACCTTTGCAGTTGGTGATTCCCTCGTGTTCAATTATGGAGCCGGGCATACTGTGGACGAAGTTAAAGAGAGCGACTACAAATCCTGCACCGCCGGCAATTCACTTAGTACAGACAGTAGTGGCGCCACCACCATTACCCTCAAGACGGCTGGCACTCATTACTTCATATGTGCTACTCCTGGACATTGTGGGGGTGGCATGAAGCTTGCTGTTAATGTCAAGGCCGGAAAAGCCGCTGCTCCGGCTGGAACTCCATCGTCTGGGAAGGGTTCACCTTCTGGTGATACCCCAACCACCCCCTCCACCACCACCGCCACACCATCTACTAGAACAAAAGCCTCTTCAGCCTCTAGTCTTTCTCCAATTCTTGCTCTGCTGATTGTTTCTTGGATCTCCTACAGTGTGTTGCCTCTGGTATGA 879 0.4858 MLVKWLQLDTQLLDACSHEKRRVAVGQKPRDPTSQLIPNFILYRNRMRGFGELGLHAYDIIWVHGQRPVYVIALGRQLLSKISDLYKQTHSSTLSQSLLCFLLPHTMAFSNAFILSLFVAINMALPALSTVYTVGDTSGWTMGADYGTWATDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTAGNSLSTDSSGATTITLKTAGTHYFICATPGHCGGGMKLAVNVKAGKAAAPAGTPSSGKGSPSGDTPTTPSTTTATPSTRTKASSASSLSPILALLIVSWISYSVLPLV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1038 292 PANTHER BLUE COPPER PROTEIN 127 249 IPR039391 GO:0009055
Glsi10g1038 292 FunFam Blue copper 128 232 - -
Glsi10g1038 292 ProSiteProfiles Phytocyanin domain profile. 130 228 IPR003245 GO:0009055
Glsi10g1038 292 MobiDBLite consensus disorder prediction 239 266 - -
Glsi10g1038 292 MobiDBLite consensus disorder prediction 233 266 - -
Glsi10g1038 292 Gene3D - 128 233 IPR008972 -
Glsi10g1038 292 ProSitePatterns Type-1 copper (blue) proteins signature. 204 220 IPR028871 -
Glsi10g1038 292 Pfam Plastocyanin-like domain 140 220 IPR003245 GO:0009055
Glsi10g1038 292 SUPERFAMILY Cupredoxins 129 226 IPR008972 -
Glsi10g1038 292 CDD Phytocyanin 130 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1038 Glsi-ChrGlsi10 6915012 6916778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1038 137 283 Miscellaneous Gene Families AT1G22480 49.660 1.52e-35 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1038 10 6915012 6916778 Glsi10g1038 10 6915012 6916778 ECH