Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0801 ATGCAACCACAGCAGGGCTCAAGAATTGATTTGGGTGAATTGAAGGCACAAATTATAAAGAAGATTGGAGTTGACAGGTCAAAACGGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGGCTGAATTTGATAAGCTGTGTAATCGGGTGCTTGGAAGGGAGAATCTTCCATTACACAATCATTTTATAAGGTCCATTTTGAAGAATGCAAGCCAAGCCAAGACCCCACCACCAATCCAGCCATCAGGTCCCCCAAAGTTTGGAACACATGCTACAAATATATCTCCTGGTAGAGAAGATGGGCATGAACTGAATAGTGTCAAGTTCCAGAATCATAATCAAAATGTGCCCATTTGGTCAAATGGAGTTTTGCCAGTGTCCCCACGTAAGGGAAGGTCTGGAATACGCGATCGGAAGCATAAGGATAGACCAAGTCCTCTTGGCCCTAATGGGAAGGTTGATTCTGTTTCTCATCAATCCACTGGTACAGAAGATAGTGGTAGTCAAGTTGATATCGAGAATGGGACTCATATTCCATGCGATTATCAGAGACCAATGCAGCATCTTCAAGCAGTTGCTGAGTTACCTGAAGATGAAAGGGGAGATGCTGGTTTGCGACGTGCTGAGAAACCAAGAATACATGGCAAAGGGCTGACCGAACCATTAATTGTTGAAGATGGGGAAGAAGTGGAGCAGTCAAACCTCTTAAGTTTCTCTAGAAGTCCACTGCTAGCACCACTTGGGATTCCATACTGCTCGGCAAGTGTGGGTGGGGCCCGTAAAGCTTTGCCAGTGGGTAGCACTGGTGATTTTGTTAGTTGTTATGATAGTGGTAGGTTGTCTGACACAGATACATTGAGAAGGCGCATGGAGCAGATTGCTGCAGTACAGGGTCTTGGGGGTGTTTCCACGGATTGTGCCAATATGTTGAATAATATGTTGGATGTTTACTTGAAACGGTTGATCACGTCTTGTGTTGATTTAGTGGGAGCCAGGTCTACCAATGAGCCAAGGAAGCCCCCTGCTCAAAAACAGCAGATTCTGAGTAAGGTTGTCAATGGCACGTGGCCAAGTAATCATTTACACATGCAGAGTGCTGGTGGACCTGGAGAACCTGTACCTGAACACAGATCACCGTCCTCAATATCTTTGCTTGATTTTAAAGTTGCTATGGAGCTGAATCCGCAGAAACTTGGAGAAGATTGGCCATTGCTGTTGGAGAAAATTTCTATGCATGCATTCAAGGAATAA 1263 0.4466 MQPQQGSRIDLGELKAQIIKKIGVDRSKRYFYYLNRFLSQKLSKAEFDKLCNRVLGRENLPLHNHFIRSILKNASQAKTPPPIQPSGPPKFGTHATNISPGREDGHELNSVKFQNHNQNVPIWSNGVLPVSPRKGRSGIRDRKHKDRPSPLGPNGKVDSVSHQSTGTEDSGSQVDIENGTHIPCDYQRPMQHLQAVAELPEDERGDAGLRRAEKPRIHGKGLTEPLIVEDGEEVEQSNLLSFSRSPLLAPLGIPYCSASVGGARKALPVGSTGDFVSCYDSGRLSDTDTLRRRMEQIAAVQGLGGVSTDCANMLNNMLDVYLKRLITSCVDLVGARSTNEPRKPPAQKQQILSKVVNGTWPSNHLHMQSAGGPGEPVPEHRSPSSISLLDFKVAMELNPQKLGEDWPLLLEKISMHAFKE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0801 420 MobiDBLite consensus disorder prediction 75 107 - -
Glsi10g0801 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 5 333 IPR024738 GO:0070461
Glsi10g0801 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 418 IPR024738 GO:0070461
Glsi10g0801 420 MobiDBLite consensus disorder prediction 362 383 - -
Glsi10g0801 420 MobiDBLite consensus disorder prediction 121 182 - -
Glsi10g0801 420 MobiDBLite consensus disorder prediction 156 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0801 Glsi-ChrGlsi10 5146834 5148096 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0801 10 5146834 5148096 Glsi08g1501 08 10873645 10874907 CCT
Glsi10g0801 10 5146834 5148096 Glsi10g0801 10 5146834 5148096 ECH