Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0740 ATGGGTTGTGAGGGTAGTGAGATGATACCGTGTCTAGATTTCTCAAAGTATGGGTTGGAATTAGAAGAAGGGAGTGAGGGATGGAAAGGTATGAGCAAGAAAGTGAGAGAGGCATGTGAGAGTCGCGGTTGTTTCCTGCTGGTGTGCAACAAAATTAGCAGTAGGGAACGTGAAGAAATGTTCATGGCCATGGAAACCTTATTTGATCTCCCTGAAGAAACCAAGCAGAAGCACACCAGCCCAAAGCCTTACAGGAGCTACCATGGCAAATGCCCTATCATTCCACTCTGTCAAAGCTTTGGCATCGATGACGCCGCACTCCCAGATACGGCTCAGGCCTTCACTCACCTCATGTGGCCTCAGGGAAACCCGCCTTTCTGTGAGACTTTGAAGTCCATGAGCTCAAAGATGCTAGAACTGAATTTCCTGCTGCTGAAGATGATTGTGGAGGGTTTTGAGCTTCCGAAGCACTACACGTCGGATGCGGAAAAAATGAAGGGCACTAGCAATTTCCGGCTGATGAAGTACGGAGTTCCTTCAAACAGCGAAGACTTGGAGGAGGGGCTGGTGGCTCATACCGACAAAAGCGCCTTAACCATACTGTGCCAGAATGAGGTGCAGGGACTGGAGGTGCTGACCAAACAAGGCAAGTGGGTTGAGTTAAAGGTACCCCAGGATGGCCTTGTGGTCATTGTTGGTGATATACTTAAGGCATGGAGCAACGGGAGACTTCATGCGGCGACACACAGGGTGATGATGAGTGGAGATAAAGAGAGGTATTCTTTTGGGCTATTTGCAATGCCAATGGAAGAGGTGGAGATTGAGGTGCCTCCCGAGTTGGTTGACAATGACCATCCTCTCCTTTACCGCCCATTCAATTACGGACAATACTTCCAATTCTATGCTTCAACTCTCACAGATAATGCACTTGAACTCTTTGCAGGTGTTTGA 951 0.4848 MGCEGSEMIPCLDFSKYGLELEEGSEGWKGMSKKVREACESRGCFLLVCNKISSREREEMFMAMETLFDLPEETKQKHTSPKPYRSYHGKCPIIPLCQSFGIDDAALPDTAQAFTHLMWPQGNPPFCETLKSMSSKMLELNFLLLKMIVEGFELPKHYTSDAEKMKGTSNFRLMKYGVPSNSEDLEEGLVAHTDKSALTILCQNEVQGLEVLTKQGKWVELKVPQDGLVVIVGDILKAWSNGRLHAATHRVMMSGDKERYSFGLFAMPMEEVEIEVPPELVDNDHPLLYRPFNYGQYFQFYASTLTDNALELFAGV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0740 316 FunFam 2-oxoglutarate-dependent dioxygenase DAO 7 314 - -
Glsi10g0740 316 Gene3D - 6 313 IPR027443 -
Glsi10g0740 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Glsi10g0740 316 Pfam 2OG-Fe(II) oxygenase superfamily 174 266 IPR044861 -
Glsi10g0740 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Glsi10g0740 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 298 - -
Glsi10g0740 316 SUPERFAMILY Clavaminate synthase-like 9 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0740 Glsi-ChrGlsi10 4694593 4696668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0740 120 301 Glycosyltransferase AT5G59530 29.032 9.83e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0740 10 4694593 4696668 Glsi10g0740 10 4694593 4696668 ECH