Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0688 ATGGATGAGAGTGGGTTGATAGAGGGCGATTTTGCCTCTGGGGTTTCAAAGGAGAACCATCGACGTTCCCTGACATTGTCATTTTCTCCACTGTTGATCATCGATGGCATTTTCTCCAGGAAGAGTTTTTCCTATAACAAGATTCCTTCGGACCCCCTCAGGCTCTCAGTGCTCAAGTTGGATGGCTCTTGCTTCGATATTCAAGTTACAAAGACAGCCACTATCGCAGAACTTAGGGAGGCAGTGGAGGCAGTCTTCAGTCACATGCCTCAGAATGGGCCAGGAAAAATTTCATGGTCACATGTTTGGGGGCAATTTTGCTTATGCTATGATGGACAGAAGCTAGTTACAGAAACAGATTATCTTAGAAACTATGGCATTAAGGATGGTGACCAGCTTCGTTTCATCCGTCATGTCTCAAACAGTTGCAATTGGAAAAGAAGGCGATTACGGAAAAGAATTGTTAGTTCAAAACAAAAAAAGGGGTCATCATCAAAAGTAAATAGCTATCAACAGAAAGATCATGATGGCAATGATGATGACAATGGCTTGGATGAAATAGTCATAGAGAATGGGAAGATTCAGCATTGCAATAATGTTGATGGTCCAGTTGGAAATCATGAAAACAGGATAACAGGCTTCTTGGGAGGGTTGTTCTCTTACACCCGGCTTGCAGTAATGAGAAGAACAAGATCAGAAGGCAGGATTTGTCCATTAAGGATTGCCAGTGGCTTACTAGGAAGTTTTAGGAAGCTTAGAAGGATTGTAAGCTTTTGCAGGAGAAGGCGCTATTATCGGAGACATACATGGATTGGCAAAAATTATAATGGGGCAAGATTATGTGGTCTCATATGCGGCTTCTGGCATGAGATTTCTGTAGAGTTTCTTGTTTTCCTGAACACAGGCCTTGATGTTGCTGCAGCTAGGGTCCATTTTCTATTCGCCTATGAAAGTTGGAAGAATGAATCGTGTGTAGGTGATGAGTTGGGTTGGACATACACTCCAAATCCAAATCTCCAATCACAAAAGCAAACCCATTCTACGCCCGCCATGGCCAACATGATCATGGCCTCCACCAAACCCATGATTCCGGTTTCCACCAATTCCCCCAGACCCAAACTTCCCATTCTCCAAATATCTCTCCCCAGAATCCCAGTAATTAAGTTCCCGAAGCCCCAAATCCTGTCCCTCTCACCCTCCACCCTCAAATCCCTTTCCCTCCTTGCAGTTACCTCACTGACCTTTGCCCCGCCCTCTCTTGCGGGAGAAATTGAGAAAGCCGCGCTCTTTGACTTCAATTTGACCCTGCCCATTATAATAGCGGAATTTCTACTTCTGATGGTAGCTTTGGACAAGTTATACTTCACCCCGCTTGGGAACTTCATGGACGGAAGAGACGCGGCGATTAGAGAGAAGCTGGGCAGCGTGAAGGACACATCGGCGGAGGTGAAGCAGCTGGAGGAACAGGCAACGGCTGTGATGAGGGCTGCGAGGGCCGAGATATCTGCAGCTCTGAATCAGATGAAGAAGGAGACTCAGGCCGAGGTGGAGCAGAAGCTGGCCGAGGGCAGGAAGAAAGTGGAGGCTGAGTTGCAGGAGGCTTTGGCTAACTTGGAGAGGCAAAAGGAAGAGACTATTAAGTCCCTTGATTCCCAAATTGCTAATCTTAGCCAGGAGATAGTTAAGAAGGTTCTTCCTACTGCTTAG 1707 0.4622 MDESGLIEGDFASGVSKENHRRSLTLSFSPLLIIDGIFSRKSFSYNKIPSDPLRLSVLKLDGSCFDIQVTKTATIAELREAVEAVFSHMPQNGPGKISWSHVWGQFCLCYDGQKLVTETDYLRNYGIKDGDQLRFIRHVSNSCNWKRRRLRKRIVSSKQKKGSSSKVNSYQQKDHDGNDDDNGLDEIVIENGKIQHCNNVDGPVGNHENRITGFLGGLFSYTRLAVMRRTRSEGRICPLRIASGLLGSFRKLRRIVSFCRRRRYYRRHTWIGKNYNGARLCGLICGFWHEISVEFLVFLNTGLDVAAARVHFLFAYESWKNESCVGDELGWTYTPNPNLQSQKQTHSTPAMANMIMASTKPMIPVSTNSPRPKLPILQISLPRIPVIKFPKPQILSLSPSTLKSLSLLAVTSLTFAPPSLAGEIEKAALFDFNLTLPIIIAEFLLLMVALDKLYFTPLGNFMDGRDAAIREKLGSVKDTSAEVKQLEEQATAVMRAARAEISAALNQMKKETQAEVEQKLAEGRKKVEAELQEALANLERQKEETIKSLDSQIANLSQEIVKKVLPTA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0688 568 Pfam Ubiquitin-like domain 53 139 IPR040610 -
Glsi10g0688 568 Coils Coil 469 559 - -
Glsi10g0688 568 SUPERFAMILY Ubiquitin-like 49 142 IPR029071 -
Glsi10g0688 568 Gene3D - 48 145 - -
Glsi10g0688 568 CDD ATP-synt_Fo_b 435 565 - -
Glsi10g0688 568 Hamap ATP synthase subunit b' [atpF2]. 429 566 IPR034679 GO:0015078|GO:0015986|GO:0045263
Glsi10g0688 568 CDD Ubl_SNRNP25 53 138 IPR040610 -
Glsi10g0688 568 Pfam ATP synthase B/B' CF(0) 437 565 IPR002146 GO:0015078|GO:0015986|GO:0045263
Glsi10g0688 568 Hamap ATP synthase subunit b [atpF]. 430 567 IPR002146 GO:0015078|GO:0015986|GO:0045263
Glsi10g0688 568 MobiDBLite consensus disorder prediction 154 182 - -
Glsi10g0688 568 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 392 510 IPR039690 GO:0000398|GO:0005689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0688 10 4402000 4406814 Glsi10g0688 10 4402000 4406814 ECH