Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0680 ATGAGGAGTATAAATAGATATTTCTTCTCTGTAATTTACTCGCTGTTTCTGATGTCGATCATCGTCGTCATGTTTCTTCCAGGTCAGTTCTTTTATCTGATCACATTCGATGGCTCATATCCGGGATATTACGTACAAATAGATCAGTATCGTATCACCATTCCTGCTAAAAAACCACTCGAAGTTGTTGGTCAACATGTACATGGCGGTGATCTTCCCCCGAACAAATCCAGTTATCCTACTGTAACCAGGAGAGTAGGAATACAGAGCAGAGAACAAAAGCTCGAAAGAGGACTTGCAAGAGCAAGAGCTTCGATTCGCAGGGCAGTAGCAGATAGGACAAGCAATCTCTCTAGTTTGATCACCACAGACAACGACAGCGACCATTACATTCCCGCCGGAGTTATATATCGTGACCCGCGCTTATTTCACCAGAGCTACCTGGAAATGGAGAAAAGATTCAAGGTATACGTATACCGAGAAGGGGATCTACCAGTTGTTCACGATGGCCCGTGCAAAGACATATACTCAATTGAAGGGAGGTTCCTTCATGAGATGGAGCACGGCGTTGGGAGGTTTCGGACCAATGATGCTAACGTAGCTCATGTGTACTTTTTGCCATTCAGTGTGACCTGGATGGTCAAGTACCTCTATACTCCACACACTTACGATCTCAATCCTTTAAAGCAGTTTGTCTCTGATTATGTGAGAGTGGTGTCTACTAGGTACCCCTTCTGGAACAGAACTCATGGTGCTGACCACTTCATGCTTGCCTGTCATGATTGGGGTCCTCATTCAACACAGGGCAACCCTTTTCTCTACAATACGTCCATCCGGGTCTTGTGCAATGCCAACACTTCAGAAGGTTTCAACCCTCGAAAGGATGTAAGCCTACCAGAAATCAACCTTTACGGAGGCATAGTATCCCCAAAACTCCTTTCACCGCAGCCGAACAACGCCCCACGTCCGTATCTAGCCTTTTTTGCAGGAGGATTGCATGGCCCAATCCGTCCCATCCTCCTCCATCACTGGAAAAACCGCGACAATGATATTCGCGTCTACGAATACCTCCCCAAAGACCTAGATTACGATTCCTTCATGCTCAACTCCAAGTTTTGTCTTTGTCCAAGTGGACATGAAGTGGCCAGCCCTAGAATCGTAGAGGCAATTTATGCCGAATGCGTGCCTGTGATCCTATCGAAGGATTATGTATTGCCGTTTAGTGATGTGCTGATATGGGAGACGTTTTCAGTGCAGGTGGATATTTCAGATATTCCACGGTTAAAAGAGATACTAAATGCAGTTTCAGAGAACAAGTATCGGAAGCTCAAGGAGGGAGTAAGGGCTGTAAGGAGACATTTTACGTTAAATCACCCGGCTAAGAGATACGATGTCTTTCACATGATCTTACACTCAATATGGCTCAGAAGATTAAATGTGGGACTCGTATAG 1452 0.4532 MRSINRYFFSVIYSLFLMSIIVVMFLPGQFFYLITFDGSYPGYYVQIDQYRITIPAKKPLEVVGQHVHGGDLPPNKSSYPTVTRRVGIQSREQKLERGLARARASIRRAVADRTSNLSSLITTDNDSDHYIPAGVIYRDPRLFHQSYLEMEKRFKVYVYREGDLPVVHDGPCKDIYSIEGRFLHEMEHGVGRFRTNDANVAHVYFLPFSVTWMVKYLYTPHTYDLNPLKQFVSDYVRVVSTRYPFWNRTHGADHFMLACHDWGPHSTQGNPFLYNTSIRVLCNANTSEGFNPRKDVSLPEINLYGGIVSPKLLSPQPNNAPRPYLAFFAGGLHGPIRPILLHHWKNRDNDIRVYEYLPKDLDYDSFMLNSKFCLCPSGHEVASPRIVEAIYAECVPVILSKDYVLPFSDVLIWETFSVQVDISDIPRLKEILNAVSENKYRKLKEGVRAVRRHFTLNHPAKRYDVFHMILHSIWLRRLNVGLV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0680 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 181 463 - -
Glsi10g0680 483 Pfam Exostosin family 151 434 IPR040911 -
Glsi10g0680 483 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 24 473 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0680 Glsi-ChrGlsi10 4345965 4349086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0680 10 4345965 4349086 Glsi08g1612 08 11491222 11493019 CCT
Glsi10g0680 10 4345965 4349086 Glsi10g0680 10 4345965 4349086 ECH