Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0631 ATGCAGAGATTGAAAGCTCTGCTACCAGACAGTAGGTGCTCAGTCCGCACACTTGGCTTTCATCGTAGACCCTTCTCTGCTCAACCAAACTATGTGGAACGTGATGACCCCCAAGACCAGATTTTAGTTGAAGGAAGAGCTATATCGAGAGCTGCTGTTCTCAACAGACCATATTCTCTTAATGCACTCACTACTTCGATGGCAGCTCGACTGAAGAGATTGTATACTTCATGGGAAGACAATCCTGATATTGGCTTTGTTTTAATGAAGGCTAGTGGGAGGGCTTTCTGTTCTGGTGCAGATGTTGTAAGGCTTTACCAATTACTGAATGAAGGAAATGCGGAAGAGGCTAAACAGTTTTTCAAGACATTGTATTCATTTATATATCTTCAAGGGACATACCTTAAGCCACATGTTGCTATTTTGGATGGTATAACTATGGGATGTGGAGCTGGAATTTCACTTCCAGGGATGTTCCGTGTGGTAACTGATAAAACTTTTTTTTCTAACCCAGAGGCTCAAATGGGTTTTCACCCTGATGCAGGAGCTTCCTTTTATCTCTCTCGTCTGCCTGGCTACCTAGGGGAATACCTGGCCCTTACAGGAGACAAGCTTAATGGTGTAGAAATGATTGCCTGTGGCCTTGCTACTCACTATACTCTAAGTGCAAGGCTTGCTTGGCTTGAAGAACGCCTTGGTAAACTGATCACAGATGATGCTTCTGTTGTAGAGACAACACTTGCACAGTATGGCGATCTTGTTTATCCTGACAGACAAAGTGTTCTTCACAAGATTGAGGCAATTGATAGATGTTTCAGTCATGATACGGTTGAGGAAATCATTGATGCTTTGGAGAAGGAAGCAGCGGAGTCTTTTGATGAATGGTATACAACAACACTTAAAAAGATACGAGAAGCCTCGCCACTGAGTTTGAAAGTTACTTTAAGATCTATTCGTGAAGGTAGATTTCAAACACTTGATCAGTGTCTTGTGCGTGAATACCGGATATCCCTTCGTGGAATTTCTAAGCAGGTCTCCTCTGATTTTCTCGAGGGTGTTCGAGCTAGACTGGTTGATAAAGATTTTGCACCAACGTGGGACCCACTTAATTTAAAAGAAGTATCGGAGGACATGGTTGAATACTATTTCTCTCCATTTAACGAAGTTCAGTTTGAACTGGAGCTGCCCACCACTTTGAGGGAACCTTATATGTGA 1215 0.4272 MQRLKALLPDSRCSVRTLGFHRRPFSAQPNYVERDDPQDQILVEGRAISRAAVLNRPYSLNALTTSMAARLKRLYTSWEDNPDIGFVLMKASGRAFCSGADVVRLYQLLNEGNAEEAKQFFKTLYSFIYLQGTYLKPHVAILDGITMGCGAGISLPGMFRVVTDKTFFSNPEAQMGFHPDAGASFYLSRLPGYLGEYLALTGDKLNGVEMIACGLATHYTLSARLAWLEERLGKLITDDASVVETTLAQYGDLVYPDRQSVLHKIEAIDRCFSHDTVEEIIDALEKEAAESFDEWYTTTLKKIREASPLSLKVTLRSIREGRFQTLDQCLVREYRISLRGISKQVSSDFLEGVRARLVDKDFAPTWDPLNLKEVSEDMVEYYFSPFNEVQFELELPTTLREPYM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0631 404 Coils Coil 274 294 - -
Glsi10g0631 404 SUPERFAMILY ClpP/crotonase 53 367 IPR029045 -
Glsi10g0631 404 Pfam Enoyl-CoA hydratase/isomerase 51 383 IPR045004 -
Glsi10g0631 404 Gene3D - 35 398 - -
Glsi10g0631 404 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 35 399 - -
Glsi10g0631 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 38 398 IPR032259 GO:0003860
Glsi10g0631 404 CDD crotonase-like 53 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0631 Glsi-ChrGlsi10 3963722 3969221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0631 1 403 Acyl Lipid Metabolism Gene Families AT4G31810 68.460 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0631 10 3963722 3969221 Glsi10g0631 10 3963722 3969221 ECH