Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0492 ATGGCTCTTCTCAGCCGAACCTCCTCCCGCCTCCCACAACTCGTGTCGCCTCAGCGTATAGTTTCTCTCCACACCACCCTTCCCTCTCTGTCACCCGCCGCATCTTCTGGCAGTGCCGCGCCGACACGATATGCTCGGCCACCGCCCCCAACGGCTTCCTCTCCTGCCGGTCTTTCCAAGGCAGGGGAGTACGTGATATCCAAGGTTGACGATCTCCTGAACTGGGCTCGGCGTGGTTCCATCTGGCCTATGACCTTCGGTCTTGCTTGCTGCGCAGTCGAAATGATGCACACGGGGGCGTCCCGTTACGATCTCGATCGTTTCGGTATCATTTTCAGGCCCAGCCCTCGCCAGTCCGATTGTATGATTGTTGCTGGCACTCTCACCAACAAGATGGCCCCTGCACTCCGCAAGGTTTATGACCAAATGCCCGAGCCTAGATGGGTCATATCTATGGGAAGTTGTGCTAACGGAGGAGGATACTACCACTACTCCTACTCTGTTGTTCGAGGATGTGATAGGATTGTTCCTGTTGACATATATGTTCCAGGCTGTCCTCCAACTGCTGAGGCCTTACTATATGGCCTCCTCCAGCTGCAGAAGAAGATCAATAGGCGCAAGGACTTCCACATGTGGTGGACAAAGTGA 648 0.5509 MALLSRTSSRLPQLVSPQRIVSLHTTLPSLSPAASSGSAAPTRYARPPPPTASSPAGLSKAGEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGASRYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFHMWWTK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0492 215 FunFam NADH-quinone oxidoreductase subunit B 2 56 215 - -
Glsi10g0492 215 SUPERFAMILY HydA/Nqo6-like 63 212 - -
Glsi10g0492 215 NCBIfam NADH-quinone oxidoreductase subunit B 65 205 IPR006138 GO:0008137|GO:0048038|GO:0051539
Glsi10g0492 215 PANTHER NADH DEHYDROGENASE 59 214 - -
Glsi10g0492 215 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 56 204 IPR006138 GO:0008137|GO:0048038|GO:0051539
Glsi10g0492 215 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 90 199 IPR006137 GO:0051536
Glsi10g0492 215 MobiDBLite consensus disorder prediction 31 58 - -
Glsi10g0492 215 Gene3D - 61 215 - -
Glsi10g0492 215 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 171 187 IPR006138 GO:0008137|GO:0048038|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0492 Glsi-ChrGlsi10 3150046 3152000 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0492 10 3150046 3152000 Glsi10g0492 10 3150046 3152000 ECH