Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0480 ATGCAGAATAGTTTTGCTCTCTTTGCCATCCACTCCTCGACGTTGCAGAGCGTACCTTGTGACAATAATATTTCTACAGGCAAACCACACAAACAACCTATACTCAAGAGGGAATTGTTGCCTTCCAAATCTTTCTCCACACTTCGCCATACACTCCAAACTCCATTATCGACCTTTCAAAATCTTGGACTTCTTGGGCATCACCCACCAACCTATCCTCATTCAAGAGTACTTTATACGCTAGCTGTTTTCACAGAGAACTATCTATTAGCCGAAAGAATCCAGAGTGATGTGCTTGGATGGTCCGATCACATGGCCTCTTCTCCTCCGTCATATCAGACAGACCTTCCTCTACCTTCAGCCTCACAACCTGGTGATAAGCCTCTGGATCATGACGATCGTTCAACTCCTGTTCCTATTCATATTGTCACCACGGCATCTCAACTTCCCGTTGAATTCCTCGAGCCTTCACCCGAAAAGCAGCTCGTCATCGGTTTCGATTGTGAGGGTGTTGACTTATGTCGCAACGGGGCTCTATGTATAATGCAGCTTGCATTTCCGGATGCTATATACCTGGTTGATGCAATTCAAGGGGGAGAGATACTTATCAGAGCTTGTAAGCCTGCACTTGAGTCTAGTTACATCACAAAAGTGATACATGATTGCAAACGAGATAGTGAGGCATTGTATTTCCAGTTTGGCATCAAGTTGAACAATGTGGTGGATACCCAGATTGCTTATTCACTGATAGAGGAGCAAGAAGGGAGGAAGAGATTTCCAGATAACTACATTTCATTTGTCGGCCTCCTTGCAGATCCACGTTATTGTGGTATATCATATCTTGAGAAAGAAGAAGTCCGCATCCTCCTTCGGCAGGATCCCAACTTTTGGACATATAGACCATTATCTGAATTAATGGTCCGTGCAGCCGCTGATGATGTTCGCTTTCTTCTCTACATTTATCACAAGATGATGGATAAATTAAACGATAGGTCTCTATGGTATCTTGCAGTTCGTGGTGCCCTGTATTGCCGATGCTTTTGTGTCAACAGTGATGATTATGCTGATTGGCCATCTCTACCTCCTATTCCAGACAAGTTTACAGTGGATGGAAATGCTCCGGAGGAAGAAATTCTTTCGGTTCTTGATGTTCCCCAAGGAAAGATGGGACGCGTGATTGGGAAAAAAGGGGCTTCAATATTGTCAATTAAGGAGTCCTGCAGTGCGGAGATTCTCACTGGAGGTGCCAAGGGCCCACCTGACAAGGTTTTCATTATGGGACCAGTGAACCAGGTGAGGAAAGCAGAGGCCATGTTAAGGGGTAGAATGTTGGATATGTACTGA 1344 0.4472 MQNSFALFAIHSSTLQSVPCDNNISTGKPHKQPILKRELLPSKSFSTLRHTLQTPLSTFQNLGLLGHHPPTYPHSRVLYTLAVFTENYLLAERIQSDVLGWSDHMASSPPSYQTDLPLPSASQPGDKPLDHDDRSTPVPIHIVTTASQLPVEFLEPSPEKQLVIGFDCEGVDLCRNGALCIMQLAFPDAIYLVDAIQGGEILIRACKPALESSYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRFPDNYISFVGLLADPRYCGISYLEKEEVRILLRQDPNFWTYRPLSELMVRAAADDVRFLLYIYHKMMDKLNDRSLWYLAVRGALYCRCFCVNSDDYADWPSLPPIPDKFTVDGNAPEEEILSVLDVPQGKMGRVIGKKGASILSIKESCSAEILTGGAKGPPDKVFIMGPVNQVRKAEAMLRGRMLDMY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0480 447 CDD Egl_like_exo 153 348 - -
Glsi10g0480 447 SMART 35exoneu6 140 329 IPR002562 GO:0003676|GO:0006139|GO:0008408
Glsi10g0480 447 PANTHER EGALITARIAN, ISOFORM B 121 444 - -
Glsi10g0480 447 CDD KH-I 381 440 - -
Glsi10g0480 447 MobiDBLite consensus disorder prediction 110 136 - -
Glsi10g0480 447 ProSiteProfiles Type-1 KH domain profile. 377 439 - -
Glsi10g0480 447 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 375 445 IPR036612 GO:0003723
Glsi10g0480 447 SMART kh_6 376 444 IPR004087 GO:0003676
Glsi10g0480 447 SUPERFAMILY Ribonuclease H-like 104 358 IPR012337 -
Glsi10g0480 447 Pfam KH domain 382 440 IPR004088 GO:0003723
Glsi10g0480 447 Pfam 3'-5' exonuclease 141 328 IPR002562 GO:0003676|GO:0006139|GO:0008408
Glsi10g0480 447 Gene3D - 91 343 IPR036397 GO:0003676
Glsi10g0480 447 Gene3D K Homology domain, type 1 368 443 IPR036612 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0480 10 3092673 3100354 Glsi10g0480 10 3092673 3100354 ECH