Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0479 ATGTTCCCTCACAATACGTCTCTGCCTGTAATGCAAGAAGCTCCATCGTTTCTTTCATCTACATTCTACGCTCATCTGCATGGTTATTGTCATGAATTTTCGTCTAGAAGTTACGTTCAGCTTCAGCTCCTTCCAATTCCTGAGACTGCATACGCTTCATCGATCATTGCAAAAATGAAAGTAAAAGCAGTAGAAAATGTGTCTTGCATATATAGAACACAATCGGATGGCATGAAACAGCCTGGCTATGTTTTACGGCTAATGCTCAAAGGAGCACCTGATTGTTTCCGCCCTCTTCCCCATCTGAATCGTCGTCTACTTTTGTTCTTCCTACTCAAAGGTACTTTATCCGCCATGGATTTCATGAAGGTCTTCGATCAGACCGTTCGAGAAATAAAGAGGGAGGTGAACCTGAAGGTACTCAAGGTTCCCGAAATCGAGCAGAAGGTATTGGATGCTACTGACAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCGGAGATTGCACAAGCTACCAAAAAATTTTCTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGACTGAGTGAAACTGGAAAGGATTGGCGTTATGTATACAAGGCATTAGCTGTTATAGAGTATTTGGTGGCACATGGATCTGAACGAGCAGTTGATGACATTGTAGAACATACTTTTCAGATCTCAGCTCTTTCCAGTTTTGAATATGTTGAGCCTAGTGGGAAGGACGTGGGAATCAATGTCAGGAAGAAGGCAGAAAATATAGTGGCCCTTTTAAATAATAAAGATAAGATACAAGAAGTCAGAAATAAAGCAGCTGCGAACCGTGACAAGTACTTTGGACTTTCTTCTACTGGAATTACATATAAGTCTGGGTCAGCCTCATCTAGTAGTAGTTACCATAGCGGTGATAGATATGGAGGCTTTGGTTCAAATGATGGTGACAGGGATAGGGACAGTTATAGAGACAATGGTAACTATGAAGAAGAAAGAGTTGAGAAATATTTCCCTGCAAAGTCACGTCATGCAGTAACAAGTGAGAATCAAGGAAACTCCTTCAAGAAGGGTTCTGCACACTCTGTCAGCAAAAATCAGGATAATGTGTCATCCAAAGTATCAAAGTCATCTACTTATGTAAAGGACTATGATAACTACAGTTCATTTCCCCCACAAAGTTCAAGTGTGCCTGAGAACAATAACGAGGATGATTTTGATCCAAGAGGAACTTCTACGACTAAGGCTTCAGCTGGAAGCTCTAACCAGCTTGATCTCTTTGGGCAAGATTTGATTGGTGACCTCATGGATGCTCCAACCTCTATTCCTGCCGAGAATCCTGCAACAAATGTTGCATCAGAGGTTGATCTTTTTGCAGATGCGACATTTGTAACAGCAGCAGCTCATGTGGACAAAGGAGCTACTTCTCAACCACTGAATGAGGTTGATCTATTTGCTTCCCAACCAGCCATTTCTTCTTCAGTAACATCAACAGTTGACTTGTTTTCCATTCCTGAACCAGTTGTGCAGCCAGACAGCAAGTCAGAAAACTCTGAACCTATAAACAGTAACATGGTTGATCCTTTTGCTGCTGTTCCACTTAATAAGTTTGATGGATCTAATCTTTTTGGTGAATTTACTTCTCAGTCTGATTCAGTCTCTTCACAGCCCTTGAAAAGTCCTATCAGTGACCGCAGCCATGATAATATGACTGGTAAATCTTTAGCAGAGTCTGAAATTCCAGCTAAAAAGGACCCTTTTCAGGTGAAGTCCGGTATTTGGGCAGATTCACTAAGCCGTGGATTGATTGATCTCAATATATCTGCACCCAAGAAGATATCCCTGGCAGATGTAGGCATTGTGGGTGGATTAAGTGATGTATTAGATGGAAGGGAGAAAGGCCCGCCACCATCAAATTACATGGGAAGAGCTATGGGATCAGGATCTGGTCTTACCAGATCTGGTTTCACACCTTCACAGCCAGCAGGCGGTGACGACGTTTTCTCAAACTTTAGCAGCCAACCATATCAATTTGGTGGGTTACAAAAGTAA 2049 0.4222 MFPHNTSLPVMQEAPSFLSSTFYAHLHGYCHEFSSRSYVQLQLLPIPETAYASSIIAKMKVKAVENVSCIYRTQSDGMKQPGYVLRLMLKGAPDCFRPLPHLNRRLLLFFLLKGTLSAMDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIAQATKKFSECQMVMNVLWTRLSETGKDWRYVYKALAVIEYLVAHGSERAVDDIVEHTFQISALSSFEYVEPSGKDVGINVRKKAENIVALLNNKDKIQEVRNKAAANRDKYFGLSSTGITYKSGSASSSSSYHSGDRYGGFGSNDGDRDRDSYRDNGNYEEERVEKYFPAKSRHAVTSENQGNSFKKGSAHSVSKNQDNVSSKVSKSSTYVKDYDNYSSFPPQSSSVPENNNEDDFDPRGTSTTKASAGSSNQLDLFGQDLIGDLMDAPTSIPAENPATNVASEVDLFADATFVTAAAHVDKGATSQPLNEVDLFASQPAISSSVTSTVDLFSIPEPVVQPDSKSENSEPINSNMVDPFAAVPLNKFDGSNLFGEFTSQSDSVSSQPLKSPISDRSHDNMTGKSLAESEIPAKKDPFQVKSGIWADSLSRGLIDLNISAPKKISLADVGIVGGLSDVLDGREKGPPPSNYMGRAMGSGSGLTRSGFTPSQPAGGDDVFSNFSSQPYQFGGLQK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0479 682 Pfam ENTH domain 145 265 IPR013809 -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 291 306 - -
Glsi10g0479 682 Gene3D - 142 281 IPR008942 -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 547 568 - -
Glsi10g0479 682 FunFam Clathrin interactor 1 136 283 - -
Glsi10g0479 682 ProSiteProfiles ENTH domain profile. 138 270 IPR013809 -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 628 682 - -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 291 422 - -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 343 400 - -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 311 341 - -
Glsi10g0479 682 PANTHER EPSIN/ENT-RELATED 122 656 - -
Glsi10g0479 682 SUPERFAMILY ENTH/VHS domain 125 270 IPR008942 -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 649 682 - -
Glsi10g0479 682 CDD ENTH 146 262 - -
Glsi10g0479 682 SMART enth_2 144 270 IPR013809 -
Glsi10g0479 682 MobiDBLite consensus disorder prediction 547 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0479 Glsi-ChrGlsi10 3081566 3091727 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0479 10 3081566 3091727 Glsi10g0479 10 3081566 3091727 ECH