Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0437 ATGGGCGAACTGTATAAAATCAGCTCGACAAATTGGAAGCCTTCCCCAGTAGTATCTCTAGCCACCAGCGTCGACGGCTTGCAGGTAGCCGCAGCTCGCGAAGATGGCTCCTTAGAGCTTTGGCTTGTCTCCCCCGGCTCCGTTGGCTGGCACTGCCAGTTGACTATTCATGGAGACCCTAATACAAGAGTATCCTCACTTATCTGGTGCTCTGGTGGTTTAAGTGGTATTCCATTCGGTCGATTATTCTCATCTAACATAGATGGGTCAGTTTCTAAATGGGATCTTTTCCACCTGACGCAGAAGACTGTGCTAGATTCTGTTGGTGTCTCAATCTGGCAAATGGCCTTGGCACCATCTAACTCTGACGTTATTAAAACCGAAGCAGAGCCTGATCACGGGGGGAATGGATATTTGAGTTATAAATACAATGATCGTGATGAATTTGAAACCAGTGAAAGTGAAGAAGATTCTGACCCACCCGGTTCTCTTGAGAAATCTGTTATTGAGTATCCACATGTAGCAATTGGTTGTGATGATGGATGCGTTCAAATATATTCCATCTCTGACTCAGATGAATTTATTTATGCAAAATCCTTGCCTCGGGTCAGTGGACGAGTTTTAAGTGTGACTTGGAGTACAGATGCCAATTTTATATATTCAGGAAGTAGCGATGGCTTAATACGATGCTGGGATGCTACATTGGGTCATGAAATCTATAGGATTACAGCTGGGCTTGGAGGTTTGGGCAGTGGACAAGATCTTTGTATATGGTCATTGCTGTCCTTAAGGTCTGGGACACTTGTTAGTGCAGACAGTAGTGGTAGTGTCCAGTTTTGGGATAGCCAACAAGGGACTCTCTTGCAAGCACATTCATTACACAAGGGAGGTGTAAATGCTCTAGCTGCAGCACCAAGTCATAATAGGGTGTTCTCCGCTGGTTCAGATGGCAAGGTTATCCTTTATAAGCTCTGTAGCGAATCAGTGTCATCAGGCAGTATTGAGTCATCAACAATGATGAAGAGATGGATCTATGTTGATTATGTGAGGGCTCATACACATGATGTCAGGGCTTTGACTGTGGCAATTCCAATAAGTCGAGAAGATCCCTTGCCAGATGAGAAGACTAAGAGAGCTCGTCGGAAAGAAAAACCCATTGATTTTAGTTACCATAAGTGGGCCCATTTGGGGGTTCCCATGCTTATATCAGCAGGTGACGACACAAAACTCTTTGCCTATGCTGTGAAGGAGTTCACTAAGTTCTCTCCACATGATATCTGCCCTGCACCGCAGAGAACACCAATTCAACTAGTGCTTAAAACAGCCTTTAATCAAGCAGCAATGCTTTTAGTCCAGTCTTCACATTCGTTAGATATTCTTTCTGTACAACTCAAAAAAGGTGTTTTTCCTGATGTTACCCGTCGCACTGCTGGAGGTTTTGCAAAAACTGATCTGCTTGCTCGAGTTAAGAGCAAGTCATCTCGGAAGATAATTTGCAGCACCATTGCTAATTCAGGGTTGCTATTTGCATACTCTGATCATGTGAAGCCAAGCCTATTTGAGTTGAAGAGGTGTGAAGTTGGGAAAAGTACTTGGAGTGTTAGTAAAAGAAAACTACCACATAGACTGCCATTTGCCCATTCTATGATTTTCACTCACGATTCCTCTCGGCTGATAGTAGCGGGTCATGATAGAAGGATATACATTGTGGACGTGGGCAGTTCAGGATTAGTGCATGTCTTTACCCCTTCTCGTGGGTTGCAAGATGATGAATTACCTCCAACCGAGCCTCCCATAACTAGATTGTTTACAAGTTCTGATGGGCAGTGGTTAGCGGCTGTGAATTGCTTTGGAGATGTATATGTTTTCAATCTGGAGATACTAAGGCAGCACTGGTTCATTTCAAGATTAGATGGTGCCTCTGTTACAGCTGGTGGATTTCCGCCCCAAAACAACAATGTACTTATAGTTACAACTTCCACAAATCAAGTGTATGCATTGGACGTAGAGGCCAAACAGTTGGGAGAATGGTCAATGCGGCATACCTTTGTTCTTCCAAAGAGATATCAGGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCCTCCCCAGCTTCATCTTCGGTGGTTGTTTATAGTGCCAGGGCAATGTGCTTGATCGACTTTGGGTTACCAGTGGAGCAAGATGATGGTGATCTCCTAAATGCTCAAGATTCAATGGCTAGGAATTTACAAAATTCTCGTAAGAGGAGACTTAAACATAGGAAGAATTTTGAAATTTTGCAATTCAGGGATCCTGTTTTATTTTTAGCACATCTTTCAAAAAATTCCTTCTTAATAATAGACAAACCCTGGTTAGAAGTGGTTAAAAGTTTAGAAGCCCCGCCAGTTGACGTACATATTTTTGGGACATAA 2418 0.433 MGELYKISSTNWKPSPVVSLATSVDGLQVAAAREDGSLELWLVSPGSVGWHCQLTIHGDPNTRVSSLIWCSGGLSGIPFGRLFSSNIDGSVSKWDLFHLTQKTVLDSVGVSIWQMALAPSNSDVIKTEAEPDHGGNGYLSYKYNDRDEFETSESEEDSDPPGSLEKSVIEYPHVAIGCDDGCVQIYSISDSDEFIYAKSLPRVSGRVLSVTWSTDANFIYSGSSDGLIRCWDATLGHEIYRITAGLGGLGSGQDLCIWSLLSLRSGTLVSADSSGSVQFWDSQQGTLLQAHSLHKGGVNALAAAPSHNRVFSAGSDGKVILYKLCSESVSSGSIESSTMMKRWIYVDYVRAHTHDVRALTVAIPISREDPLPDEKTKRARRKEKPIDFSYHKWAHLGVPMLISAGDDTKLFAYAVKEFTKFSPHDICPAPQRTPIQLVLKTAFNQAAMLLVQSSHSLDILSVQLKKGVFPDVTRRTAGGFAKTDLLARVKSKSSRKIICSTIANSGLLFAYSDHVKPSLFELKRCEVGKSTWSVSKRKLPHRLPFAHSMIFTHDSSRLIVAGHDRRIYIVDVGSSGLVHVFTPSRGLQDDELPPTEPPITRLFTSSDGQWLAAVNCFGDVYVFNLEILRQHWFISRLDGASVTAGGFPPQNNNVLIVTTSTNQVYALDVEAKQLGEWSMRHTFVLPKRYQEFPGEVIGLSFPPSPASSSVVVYSARAMCLIDFGLPVEQDDGDLLNAQDSMARNLQNSRKRRLKHRKNFEILQFRDPVLFLAHLSKNSFLIIDKPWLEVVKSLEAPPVDVHIFGT 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0437 805 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 232 - -
Glsi10g0437 805 SUPERFAMILY WD40 repeat-like 253 672 IPR036322 GO:0005515
Glsi10g0437 805 Gene3D - 261 465 IPR015943 GO:0005515
Glsi10g0437 805 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 805 IPR044622 GO:0010073|GO:0035266
Glsi10g0437 805 Pfam WD domain, G-beta repeat 207 232 IPR001680 GO:0005515
Glsi10g0437 805 Gene3D - 491 716 IPR015943 GO:0005515
Glsi10g0437 805 Gene3D - 3 136 IPR015943 GO:0005515
Glsi10g0437 805 SUPERFAMILY WD40 repeat-like 10 327 IPR036322 GO:0005515
Glsi10g0437 805 Gene3D - 170 260 IPR015943 GO:0005515
Glsi10g0437 805 SMART WD40_4 536 571 IPR001680 GO:0005515
Glsi10g0437 805 SMART WD40_4 3 42 IPR001680 GO:0005515
Glsi10g0437 805 SMART WD40_4 49 95 IPR001680 GO:0005515
Glsi10g0437 805 SMART WD40_4 193 232 IPR001680 GO:0005515
Glsi10g0437 805 SMART WD40_4 98 187 IPR001680 GO:0005515
Glsi10g0437 805 SMART WD40_4 284 323 IPR001680 GO:0005515
Glsi10g0437 805 SMART WD40_4 243 281 IPR001680 GO:0005515
Glsi10g0437 805 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 241 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0437 Glsi-ChrGlsi10 2776378 2783943 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0437 10 2776378 2783943 Glsi10g0437 10 2776378 2783943 ECH