Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0404 ATGGACCCATCTATAGTGAAGCTTCTTGAAGATGATGAGGTTTCCCTCTGTCTTCTCTTTATTTTTATTTCCAGAAAAACCTATGTTCTCATACAAATTGGGGATTATGTTTCACTCTTTTTAAAACCTTCCACTGGTTTTGGGTGTCCACAGGATGAAACAATGCATTCAGGGGCGGATGTGGAAGCCTTCCAGGCTGCCTTAAATAGAGACATAGGAGGAGACGCATCTACTTCTCAGCCTTCTGGTTCAGATGCAGTTTTGTCTCAAGGAAGTAATAACACATTCAGTCAGTCATTACCACAGTGGCCAACTTCTAGCCATGAAAACAAGACAGGCTGTCAAACTCAAGACCCTAAAACTGCACAGCAGCAAGAGCAACCTTCATCTGAGATGGAGATGAAGCAACATGGAACTCTCGTGGAACAATTACAAAGTGTTGGTTCTCAGGATGTAAATCATACTCCTTTATCACAGAAACAATCTCAAGATGAACGTCACCAAGGGCAGACTGTACAAGGTTCCCTCCAAAATCCTCAAACAACTGGAATCCCAAATCCTGGAAAAGATCCTGTCCTTAATCTTGAGCCAGTCAAAACACATAATCCCAGCAATGAATCTCAATATTTCAAGTTGCAGCAGATGAGTAATCAGCAGGCAACAGTCACTGAGCAGCCAAGCAACCAAATTAATCGGAGTAAACAGGTACCATTTGGCCTGTTGCTACCCATTTTGCTTCCCCAGCTTGCCAAAGATAGAGCCATGCAACTCCAAACTTTATTTGCTAAACTGAAGAAAGATGAAATTCCCAAAGATAATTTTGTGAGGCTAATGAAAGGTATTGTGGGGGACCAGATGCTTAGATTGGCATTAGCGAAAGTGCAATCACAGACAAGATCTAACCAAGGACCTGCAGGGCAGCACCCTATAAGGATGCCTACTGTTAGTTCAGGGGCAACACAATATAATGATCCCCATGCATTAGCACAACAGCATCAGAGAAGTGTGAATACTCCTGCAGATCAATCTCATATTACTTCTTCAGCTGTCCATATGAAAAATGAGTCAATTTATTCAACTACGGACAACAATGCTAAAAAATCTCAGGATTTGGATGTTAAAATAGAACCTCAGGGAGTGCAACCAAGCCAATTGTCATCTTCCAATTCCAACACTGCTAGTCAAGAAACAGAAAGATCCTCGATTCACATACAAGGGCTTAATAAGCAGCAGCAGCAGCATCTGCATTTTCCTTCAGCGTATGGAAGTAACGGTGGTAATTATAACCCTTATTCTGGGCCGGCCAGTAGTTCCACATCAACTCTCAAACCACAACATCATGATTCACATATGAGGCAAATTCCACATCAAAACATTGGTCCAAATCACTTAGGGGGAGCAACACAGGGCATGAATGTGATTGGTATGCAAAAACTTGATAGACAGAATTCTGTCCATGATCCAAAGAGATTACAGGGTGGATCTGTTTCTCCTGGGGTAAATAATACAGCATCACAACAAACATCCAATACTTGGCAACCATCAATAAATAAAGAACAAAGTTCGGGCTTGTTGTCATCAGTTTCCTACATCAAAAAGGAACCTAATGACCTGTCTACCGAGCAGCAACATAGGCATCATTTATCTAAATTGCATGGGCTACCTTCTGTTAACACTATACAGATTGAACAGGGAAATACCAATCAAGGAACTTTAAAGGATGAGTTTTCAAGAGGTCTTCCAGCACCTACAAGCATGCCACCGACGACATCAGCAAGCTTGCTGCCATCCAATTCTGCTTCCCCTTCTATAATGGCTCAACTAGAACCAAATGTCCCGTTAAACTCTCAGATCCCACCAAACACGTCTGGGATTAATGCAAGAATGGCTCTGAAAAAGCCTTCTCTTGGCCAGAAGAAACCACTTGAAGCGCTTGGTTCATCACCGCCTCCTCCGAGTAAGAAACAGAAGGTATCTGGGGCTTCTATGGAACAAAGCATTGAACAACTTAATGATGTTACTGCTGTTAGTGGAGTTGATCTTAGGGAGGAGGAAGAGCAATTATTTTCAGGTTCCAAAGAGGACAGTCGAATTTCGGAAGCGTCTCGCAAAGTTGTGCAAGAAGAAGAAGAAAGGCTGATTCTGCAGAAAGCTCCATTGCAGAAAAAATTGATTGAGATTAGCCCACAAAGCCTTATACCATTTTATGTTGACGCTGTGGCAGTGAACAAGTGTGGTTTGAAGGGTATGAGCAATGACGTAGAGAAATGCTTGTCTCTGTGTGTGGAGGAAAGAATGCGTGGACTGATAAGTGATCTAATTAGACTATCAAAACAGCGAGTTGATTTTGAGAAGACTAGACATCGGGTTGTTGTCACATCAGATCTTAGGCAGCAAATCATGACAATAAATAAGAAAGCAAGGGAAGAGTGGGAGAAAAAACAGGCAGAAGCAGAGAAACTTCGGAAACTTAATGAAGCTGAGAGTAATCCTGGAGTTGATGGTGACAAGGAGAAGGATGAGAATCGTACTAAATTGACGAAGGCAAACAAAGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCGCGAGCTGCTGTTGGGGGAGATGACATGCTGTCAAAATGGCAACTTATGGCTGAGCAAGCCCGTCAAAAACGTGAAGGAGGGATGGACACATCATCTAGTTCTCAACCAGCTAAAGATGTGAGCCATAAGTCTTTATCTTCATCTGGAAGAAGTACAAAGGATAATCAAGAGGGGGAGAAAAGAGGTCTTGCTTCTCTTGCAACTTCTGGGTCTGCTAGAAAACATGGGAGAAATCAGGTCATTGCACCTCAGTCTCGGGTGGCTCGTAGCATCGCTGTTAAGGATGTAATTGCAGTCCTGGAAAGGGAACCCCAGATGTCCAAATCACCCCTAATATATCGCCTGTACGAGAGAATACATTCTGATGGCCCAGCTGAATAA 2979 0.4273 MDPSIVKLLEDDEVSLCLLFIFISRKTYVLIQIGDYVSLFLKPSTGFGCPQDETMHSGADVEAFQAALNRDIGGDASTSQPSGSDAVLSQGSNNTFSQSLPQWPTSSHENKTGCQTQDPKTAQQQEQPSSEMEMKQHGTLVEQLQSVGSQDVNHTPLSQKQSQDERHQGQTVQGSLQNPQTTGIPNPGKDPVLNLEPVKTHNPSNESQYFKLQQMSNQQATVTEQPSNQINRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDNFVRLMKGIVGDQMLRLALAKVQSQTRSNQGPAGQHPIRMPTVSSGATQYNDPHALAQQHQRSVNTPADQSHITSSAVHMKNESIYSTTDNNAKKSQDLDVKIEPQGVQPSQLSSSNSNTASQETERSSIHIQGLNKQQQQHLHFPSAYGSNGGNYNPYSGPASSSTSTLKPQHHDSHMRQIPHQNIGPNHLGGATQGMNVIGMQKLDRQNSVHDPKRLQGGSVSPGVNNTASQQTSNTWQPSINKEQSSGLLSSVSYIKKEPNDLSTEQQHRHHLSKLHGLPSVNTIQIEQGNTNQGTLKDEFSRGLPAPTSMPPTTSASLLPSNSASPSIMAQLEPNVPLNSQIPPNTSGINARMALKKPSLGQKKPLEALGSSPPPPSKKQKVSGASMEQSIEQLNDVTAVSGVDLREEEEQLFSGSKEDSRISEASRKVVQEEEERLILQKAPLQKKLIEISPQSLIPFYVDAVAVNKCGLKGMSNDVEKCLSLCVEERMRGLISDLIRLSKQRVDFEKTRHRVVVTSDLRQQIMTINKKAREEWEKKQAEAEKLRKLNEAESNPGVDGDKEKDENRTKLTKANKEEDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDTSSSSQPAKDVSHKSLSSSGRSTKDNQEGEKRGLASLATSGSARKHGRNQVIAPQSRVARSIAVKDVIAVLEREPQMSKSPLIYRLYERIHSDGPAE 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0404 992 MobiDBLite consensus disorder prediction 554 574 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 884 951 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 583 601 - -
Glsi10g0404 992 CDD TAF4 665 980 IPR007900 GO:0005669|GO:0006352
Glsi10g0404 992 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 52 986 IPR045144 GO:0005669|GO:0006352
Glsi10g0404 992 MobiDBLite consensus disorder prediction 295 354 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 379 444 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 377 463 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 151 193 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 821 859 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 495 522 - -
Glsi10g0404 992 Pfam Transcription initiation factor TFIID component TAF4 family 670 981 IPR007900 GO:0005669|GO:0006352
Glsi10g0404 992 Pfam RCD1-SRO-TAF4 (RST) plant domain 232 295 IPR022003 -
Glsi10g0404 992 Coils Coil 698 718 - -
Glsi10g0404 992 ProSiteProfiles RST domain profile. 229 300 IPR022003 -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 72 138 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 892 918 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 535 601 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 151 187 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 481 522 - -
Glsi10g0404 992 Coils Coil 804 828 - -
Glsi10g0404 992 MobiDBLite consensus disorder prediction 639 664 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0404 10 2604047 2611071 Glsi10g0404 10 2604047 2611071 ECH